PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00006974-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | G2-like | ||||||||
Protein Properties | Length: 130aa MW: 14231.3 Da PI: 9.1242 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 52.9 | 8.3e-17 | 55 | 86 | 25 | 56 |
G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRla 56 +AtPk+i +lmkv+gLt ++vkSHLQkYRl+ SMil_00006974-RA_Salv 55 SVATPKQITQLMKVEGLTSDEVKSHLQKYRLH 86 57****************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 1.33E-6 | 55 | 86 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.6E-13 | 55 | 86 | IPR006447 | Myb domain, plants |
Gene3D | G3DSA:1.10.10.60 | 2.3E-14 | 56 | 86 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 130 aa Download sequence Send to blast |
MEASRQELQS QRMKQLSADK AKWMSSATLW NHQVPPPELR LAPPEDSHVC TRENSVATPK 60 QITQLMKVEG LTSDEVKSHL QKYRLHTGIQ APSPVVVVGG IWVPPEYAAH AGASPAAFYG 120 ATAPTILPPR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022999194.1 | 4e-23 | myb family transcription factor EFM-like isoform X1 | ||||
Refseq | XP_022999195.1 | 4e-23 | myb family transcription factor EFM-like isoform X2 | ||||
TrEMBL | A0A0K9PLA5 | 1e-20 | A0A0K9PLA5_ZOSMR; Myb family transcription factor | ||||
TrEMBL | A0A2G3BNB1 | 2e-20 | A0A2G3BNB1_CAPCH; Uncharacterized protein | ||||
STRING | Lus10043304 | 7e-22 | (Linum usitatissimum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA20358 | 2 | 3 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G03500.1 | 1e-13 | G2-like family protein |