PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00006209-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | ERF | ||||||||
Protein Properties | Length: 126aa MW: 14126.7 Da PI: 11.2648 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 31.4 | 4.8e-10 | 32 | 54 | 2 | 29 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrk 29 +++GVr+++ +g+W+AeIrdp++ k SMil_00006209-RA_Salv 32 KFRGVRRRP-WGKWAAEIRDPCK----K 54 89*******.**********854....3 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 11.416 | 32 | 90 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.7E-4 | 32 | 53 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.16E-6 | 32 | 58 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 3.0E-10 | 32 | 56 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 0.0072 | 32 | 75 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 126 aa Download sequence Send to blast |
MCIPNCIWMS LHPKPKQVSS KAAALAEGEC QKFRGVRRRP WGKWAAEIRD PCKKEHNVLS 60 GDNSCDDFRN RSSPASVLSF KSSLTGARRA RPVLPKPKMK CVGPFARLRR RNIVSACRII 120 PPTPCL |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012858195.1 | 4e-12 | PREDICTED: ethylene-responsive transcription factor CRF4-like |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA494 | 23 | 126 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23750.2 | 3e-10 | cytokinin response factor 2 |