PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00005434-RA_Salv
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family Nin-like
Protein Properties Length: 319aa    MW: 36098 Da    PI: 6.6651
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00005434-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK82.73.5e-26227277252
                 RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                            + ++ l+d  +yF+lpi+dAA++L++c+Tv+K+iCR++G+ RWP+Rki+s+
  SMil_00005434-RA_Salv 227 TRNLGLKDFVEYFHLPIEDAARKLNICPTVMKKICRKHGVLRWPYRKINSI 277
                            67999********************************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.95217297IPR003035RWP-RK domain
PfamPF020421.8E-23229277IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
LKKKPSHTAV QRGVAAAAGT AAHLEMADST SENPLLLCPS QGQDQNYFNL DDLLETENLL  60
SDPVIWQDFS GNSPAPDSAF LQHYQAPENP VSMALSVFTA PRAQYNCACC QILREITHTN  120
GMYLKRLEIH GVFGIITHAL LGIYECGSSL QTQMFDFHKE STVTVKNFLV AYYEVCRQEG  180
YSPIQDPLSS FYEALSVGLD QATPHDFPGD YEAGSVKIPL AMQRERTRNL GLKDFVEYFH  240
LPIEDAARKL NICPTVMKKI CRKHGVLRWP YRKINSIERK ISKSEKILEA CADDERQRAL  300
EDIQKYRKQL NNIYAQFTN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011088847.11e-104uncharacterized protein LOC105169981
TrEMBLA0A4D9APW71e-126A0A4D9APW7_SALSN; Glutamate receptor, ionotropic, plant
STRINGMigut.B01423.1.p2e-96(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA35052027
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59580.25e-16Nin-like family protein