PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SMil_00005192-RA_Salv

Organism

Salvia miltiorrhiza

Taxonomic ID

226208

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia

Family

Dof

Protein Properties

Length: 272aa MW: 29452.7 Da PI: 9.9196

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SMil_00005192-RA_Salv	genome	NDCTCM	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.2	4.3e-39	31	88	4	61
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +kcprCds+ntkfCyynnyslsqPryfCkaCrryWt+GG+lrnvPvGgg+rk+k+ SMil_00005192-RA_Salv 31 PPQKCPRCDSANTKFCYYNNYSLSQPRYFCKACRRYWTHGGTLRNVPVGGGCRKSKRP 88 5689***************************************************985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	2.3E-33	33	87	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.208	33	87	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	1.0E-22	34	82	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	35	71	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence Send to blast
MEPRRNDQDR LKHQQDHRVK PPETQQMAPP PPQKCPRCDS ANTKFCYYNN YSLSQPRYFC 60 KACRRYWTHG GTLRNVPVGG GCRKSKRPKP SSAPSSSAGE IGRSSQPAIP SQNLTPLNSG 120 QQPMRPFPPI MSSMANTFYS GGSFLSSLAA MQSLSTGISQ APALNLGGGG GGGQYDALLQ 180 GVSLPLKPQP PPPHQFQLQI NDHYFPSQHN LTTPPPRPSW TQSFINRGPA AAATTSAASS 240 SFWTGDGDNQ AGSSFNPNHW QDSNPGFDPS SQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011096324.2	7e-86	dof zinc finger protein DOF3.1
TrEMBL	A0A2G9GQ55	2e-86	A0A2G9GQ55_9LAMI; Uncharacterized protein
STRING	Migut.M01126.1.p	1e-76	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	3e-29	TARGET OF MONOPTEROS 6