PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00003947-RA_Salv
Common NameWRKY31
Organism
Salvia miltiorrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family WRKY
Protein Properties Length: 516aa    MW: 55885.4 Da    PI: 8.6118
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00003947-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.41.1e-31234290259
                            --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                            +DgynWrKYGqK+vk se+prsYY+Ct+++Cpvkkkvers  ++++ eitY+g+Hnh+
  SMil_00003947-RA_Salv 234 NDGYNWRKYGQKHVKASECPRSYYKCTHPNCPVKKKVERSL-NGHISEITYKGQHNHD 290
                            8****************************************.***************7 PP
2WRKY106.11.8e-33405463159
                            ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                            ldDgy+WrKYGqK+vkg+++prsYYrCt+agC+v+k+ver++ dpk v++tYeg+Hnh+
  SMil_00003947-RA_Salv 405 LDDGYKWRKYGQKVVKGNPHPRSYYRCTYAGCNVRKHVERASADPKSVITTYEGKHNHD 463
                            59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.9E-28225292IPR003657WRKY domain
PROSITE profilePS5081122.848228292IPR003657WRKY domain
SuperFamilySSF1182903.27E-25231292IPR003657WRKY domain
SMARTSM007745.5E-35233291IPR003657WRKY domain
PfamPF031068.9E-24234290IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.1E-36392465IPR003657WRKY domain
SuperFamilySSF1182901.02E-29397465IPR003657WRKY domain
PROSITE profilePS5081137.86400465IPR003657WRKY domain
SMARTSM007741.0E-39405464IPR003657WRKY domain
PfamPF031062.1E-26406463IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 516 aa     Download sequence    Send to blast
MAQTVGDAQP SSRAKPTIQV PPRGSVGFLY ANGSGPGFSP GPMTLVSSFF PEQSPFSFSQ  60
LLAGAMASPL AAKPGFPPAY DSWKDGKEKS ICDAGSNSEA GVGRKWDRPV NLVVPPPPQL  120
QVESMGMSPL FMVPPGLSPS GLMSPLQSPF SMSHQQALAH VTAQAALSHS IMHMQEEFQH  180
SSSAEAIVNH SSSAKTEALT QQKNPSPLHL ENTKKELAEV SQSSKAAAGD KPANDGYNWR  240
KYGQKHVKAS ECPRSYYKCT HPNCPVKKKV ERSLNGHISE ITYKGQHNHD PPKPTKREKD  300
SSVLDTSTNS QANSVLASED QIETERLNEN QNFATTSQQS FDPCAVANHK KDVKEAAIVV  360
DEGDADEPAA KRRTLDIGQS VPASSHQAVP DSKIVLQTRS EVDLLDDGYK WRKYGQKVVK  420
GNPHPRSYYR CTYAGCNVRK HVERASADPK SVITTYEGKH NHDIPIGKHG SSHGAATQHP  480
KTQKVAAVSK DISESGYGNK DQIPTTLQLK EEQIAA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A5e-37234465877Probable WRKY transcription factor 4
2lex_A5e-37234465877Probable WRKY transcription factor 4
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKM8231540.0KM823154.1 Salvia miltiorrhiza WRKY protein (WRKY31) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011085706.10.0probable WRKY transcription factor 4 isoform X1
TrEMBLA0A0D5Y9A70.0A0A0D5Y9A7_SALMI; WRKY protein
STRINGMigut.K01298.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43142344
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.11e-106WRKY DNA-binding protein 4