PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00003681-RA_Salv
Organism
Salvia miltiorrhiza
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family bZIP
Protein Properties Length: 596aa    MW: 65053.8 Da    PI: 6.2549
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00003681-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_168.88.4e-22462524163
                            XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                            ++elk e+rkq+NRe+ArrsR+RK+ae eeL++kv++L +eN++Lk+el+e  k ++kl+ e+
  SMil_00003681-RA_Salv 462 QPELKWEKRKQSNRESARRSRLRKQAEAEELATKVQTLITENMTLKSELDEFMKFSKKLELEN 524
                            5799****************************************************9998876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142235.6E-1928140No hitNo description
PfamPF077772.8E-19206284IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1702.7E-13460520No hitNo description
SMARTSM003381.1E-18462526IPR004827Basic-leucine zipper domain
PfamPF001702.5E-19463524IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.243464527IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.94E-9466518No hitNo description
CDDcd147024.80E-18468515No hitNo description
PROSITE patternPS000360469484IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 596 aa     Download sequence    Send to blast
MHSVKEKVNK ALLTKIDKTV TDEKLHDMND NARATILLNL SSSVVRKVSH HACAKELWDE  60
LNSIYAAPSE VSTWSLQNQF MSFQMDSSKD VDTNMEIFNK LLHDLKLAGD DSIEKYAPQI  120
LLNSIPESFV EFISYSNAIS KTMSSSEWLI DSGCTFHVTS FEHMIHKLQP VKSGHVALAD  180
GQNCEIIGKA ARWSSEIPEE LRRIRQSVAE QDQSAAPVYH DWAMMQAYYG PQFAVPPYLN  240
SAVASPHIPT PYMWMVPPQY TVPPYGASYP GYYSHEGAYG HPGVSTAGTS FSMATPAESS  300
GNTDGGIVKK KSKDSQGLAV PIENGNADGG GHGPDRRLSE SEVTDDSSDG TNEVTAEAGQ  360
SGVKRSLAGS PKSGKLLLSS SLSISAAKGD KDQKKGSADV GRGYGSTEEA SRPAYTPAKA  420
KENASTVPEL KGSSILDVKP VAACNPRSSI ANEAQLQGTP NQPELKWEKR KQSNRESARR  480
SRLRKQAEAE ELATKVQTLI TENMTLKSEL DEFMKFSKKL ELENGTLMEK LKDARPGEVD  540
FLKIDGVRPK PVDTVNLLAR VESNGATERR DEDGDSYEQR SRAAKLHQLL DAVAAG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1478484RRSRLRK
2478485RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020551515.11e-121common plant regulatory factor 1 isoform X2
TrEMBLA0A4D9AV770.0A0A4D9AV77_SALSN; Plant G-box-binding factor
STRINGMigut.B01828.1.p1e-102(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31132447
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.28e-28G-box binding factor 3