PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00002992-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | WOX | ||||||||
Protein Properties | Length: 182aa MW: 20571.9 Da PI: 11.97 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 19.7 | 1.5e-06 | 39 | 71 | 2 | 33 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeL 33 ++R+++ +eq+ +Le+ F++ +p ++e++++ SMil_00002992-RA_Salv 39 KPRWNPRSEQIWILEAIFNSgMVNPPRDEIRRI 71 89*****************99*********998 PP | |||||||
2 | Wus_type_Homeobox | 45.9 | 1.3e-15 | 38 | 73 | 2 | 37 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqrita 37 +++RW+P++eQi iLe++++sG+++P+++ei+ri+a SMil_00002992-RA_Salv 38 PKPRWNPRSEQIWILEAIFNSGMVNPPRDEIRRIKA 73 689*******************************97 PP |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0008284 | Biological Process | positive regulation of cell proliferation | ||||
GO:0009735 | Biological Process | response to cytokinin | ||||
GO:0009793 | Biological Process | embryo development ending in seed dormancy | ||||
GO:0010075 | Biological Process | regulation of meristem growth | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005737 | Cellular Component | cytoplasm | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence Send to blast |
MGALFTKQVR WPHDINSISS NKSPYAQGHG CDERTPEPKP RWNPRSEQIW ILEAIFNSGM 60 VNPPRDEIRR IKANGGRLRE DREEAARRIE IQGWGGLEFR RRVGPGKAER RTGGGGAAES 120 KAERRTFSSP ASQQWRSNAA ACAAPSVSEQ QCSGGGGRQQ RRRTRRRGRG RGRGRERERE 180 KK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 159 | 165 | QRRRTRR |
2 | 168 | 180 | RGRGRGREREREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33880.1 | 1e-22 | homeobox-3 |