PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00001124-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | WRKY | ||||||||
Protein Properties | Length: 242aa MW: 27118.7 Da PI: 9.5644 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 59 | 9.1e-19 | 102 | 139 | 1 | 37 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEE CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkk 37 ++Dgy+WrKYGqK+ ++++ pr+YY+C+ + +Cpvkkk SMil_00001124-RA_Salv 102 VKDGYQWRKYGQKVTRDNPSPRAYYKCSLSpSCPVKKK 139 58**************************999******8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 18.062 | 97 | 138 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 4.18E-16 | 98 | 143 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 3.1E-17 | 100 | 139 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.6E-10 | 102 | 151 | IPR003657 | WRKY domain |
Pfam | PF03106 | 9.5E-15 | 103 | 139 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence Send to blast |
MQHDELIQEL SRMKWENKKL TEILAVVCRN YHDFTKIDCV EELYASKEKK NPTSCKAPAT 60 FPRLLRRRGS ARRRAGRGRL SRIPRESTCE SIRRIQASLL VVKDGYQWRK YGQKVTRDNP 120 SPRAYYKCSL SPSCPVKKKS RFTRAAQPHP SGAEIPATTA TAAAEAPAAA ANSPYLSDPT 180 ICSRIENEES EIQQVLVEQM ASSLTRNHSF TAALVAAITG RILDDGSEEN DDSYSISRVI 240 SE |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KM823181 | 0.0 | KM823181.1 Salvia miltiorrhiza WRKY protein (WRKY58) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0D5Y9D3 | 1e-103 | A0A0D5Y9D3_SALMI; WRKY protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4500 | 22 | 42 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25000.1 | 7e-34 | WRKY DNA-binding protein 60 |