PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00001057-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | BES1 | ||||||||
Protein Properties | Length: 688aa MW: 77754.3 Da PI: 6.6003 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 139.6 | 3.1e-43 | 64 | 212 | 4 | 130 |
DUF822 4 grkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr....................k 71 rk++ kE+E++k+RER+RRai+++++aGLR++Gn++lp+raD+n+V++AL+reAGw+ve+DGttyr + SMil_00001057-RA_Salv 64 SRKERDKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVIAALAREAGWTVEPDGTTYRqtppapsmqpqsqpppishfN 151 799****************************************************************666664443322222221111 PP DUF822 72 gskpl.eeaeaagssasaspesslq.sslkssalaspvesysaspksssfpspssldsisl 130 + +++ ++a+ +g +s+es+l +l++++++s v+ + +++++++ +sp+slds+ + SMil_00001057-RA_Salv 152 SIQQNnSNASNVGVNPVRSVESPLYsGALRNCSVRSSVDCQPSTLRADENLSPTSLDSVVA 212 1111112222222222244444443344455555555555555555555555555555544 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 2.1E-47 | 63 | 233 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene3D | G3DSA:3.20.20.80 | 2.7E-166 | 254 | 685 | IPR013781 | Glycoside hydrolase, catalytic domain |
SuperFamily | SSF51445 | 6.1E-157 | 254 | 685 | IPR017853 | Glycoside hydrolase superfamily |
Pfam | PF01373 | 2.6E-78 | 276 | 645 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 4.5E-55 | 291 | 305 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 4.5E-55 | 312 | 330 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 4.5E-55 | 334 | 355 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 4.5E-55 | 427 | 449 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 4.5E-55 | 500 | 519 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 4.5E-55 | 534 | 550 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 4.5E-55 | 551 | 562 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 4.5E-55 | 569 | 592 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 4.5E-55 | 607 | 629 | IPR001554 | Glycoside hydrolase, family 14 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000272 | Biological Process | polysaccharide catabolic process | ||||
GO:0048831 | Biological Process | regulation of shoot system development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0016161 | Molecular Function | beta-amylase activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 688 aa Download sequence Send to blast |
MNTNANTMNH CFAAAAQDLD PQPPPPPATS ISTQPYHTQP QPQRRLRGFA ATNSNSTATA 60 PIKSRKERDK EKERTKLRER HRRAITSRML AGLRQYGNFP LPARADMNDV IAALAREAGW 120 TVEPDGTTYR QTPPAPSMQP QSQPPPISHF NSIQQNNSNA SNVGVNPVRS VESPLYSGAL 180 RNCSVRSSVD CQPSTLRADE NLSPTSLDSV VAERDVKLDK YSSASAIDSL ECLKAGQLVQ 240 DVHCREHGNG LPETSYIPVY VRLATGSINN FCQLMDPEGV KEELQHLRSL NVDGVVVDCW 300 WGIVEAWTPK KYEWAGYREM FNIIREFGMK LQVVMAFHEY GGPDTGGIFI SLPQWVLEIG 360 KNNQDIFFTD REGRRNTECL SWGIDKERVL KGRTGIEIYF DFMRSFRTEF DDLFTEGLIS 420 AVEVGLGASG ELKYPSFSER MGWRYPGIGE FQCHDKYLLQ NLQRAAKLRG HSFWARAPDN 480 AGYYNSKPHE TGFFCDSGDY DSYYGRFFLH WYTQVLIDHA DNVLSLASLA FEDVQIVVKI 540 PAVYWWYKTS SHAAELTAGF YNPSNQDGYA PLFEVLKKHS VTMKFVISGF QASYPEIDEA 600 LSDPVGLNWQ VLNSGWDRGL TVAGQNAVPC YNRDGFMRLV ETARPRDHPD RRHFSFFVFQ 660 QPSPLIQRTI CFSEIDYFVK SMHGEVSN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1v3i_A | 1e-125 | 255 | 685 | 10 | 444 | Beta-amylase |
1wdq_A | 1e-125 | 255 | 685 | 10 | 444 | Beta-amylase |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00543 | DAP | Transfer from AT5G45300 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011082155.1 | 0.0 | beta-amylase 8 | ||||
Swissprot | Q9FH80 | 0.0 | BAM8_ARATH; Beta-amylase 8 | ||||
TrEMBL | A0A4D9BKE8 | 0.0 | A0A4D9BKE8_SALSN; Uncharacterized protein | ||||
STRING | Migut.A00486.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1607 | 24 | 48 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G45300.2 | 0.0 | beta-amylase 2 |
Publications ? help Back to Top | |||
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