PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00001057-RA_Salv
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family BES1
Protein Properties Length: 688aa    MW: 77754.3 Da    PI: 6.6003
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00001057-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822139.63.1e-43642124130
                 DUF822   4 grkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr....................k 71 
                             rk++ kE+E++k+RER+RRai+++++aGLR++Gn++lp+raD+n+V++AL+reAGw+ve+DGttyr                    +
  SMil_00001057-RA_Salv  64 SRKERDKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVIAALAREAGWTVEPDGTTYRqtppapsmqpqsqpppishfN 151
                            799****************************************************************666664443322222221111 PP

                 DUF822  72 gskpl.eeaeaagssasaspesslq.sslkssalaspvesysaspksssfpspssldsisl 130
                            + +++ ++a+ +g    +s+es+l   +l++++++s v+ + +++++++ +sp+slds+ +
  SMil_00001057-RA_Salv 152 SIQQNnSNASNVGVNPVRSVESPLYsGALRNCSVRSSVDCQPSTLRADENLSPTSLDSVVA 212
                            1111112222222222244444443344455555555555555555555555555555544 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.1E-4763233IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene3DG3DSA:3.20.20.802.7E-166254685IPR013781Glycoside hydrolase, catalytic domain
SuperFamilySSF514456.1E-157254685IPR017853Glycoside hydrolase superfamily
PfamPF013732.6E-78276645IPR001554Glycoside hydrolase, family 14
PRINTSPR007504.5E-55291305IPR001554Glycoside hydrolase, family 14
PRINTSPR007504.5E-55312330IPR001554Glycoside hydrolase, family 14
PRINTSPR007504.5E-55334355IPR001554Glycoside hydrolase, family 14
PRINTSPR007504.5E-55427449IPR001554Glycoside hydrolase, family 14
PRINTSPR007504.5E-55500519IPR001554Glycoside hydrolase, family 14
PRINTSPR007504.5E-55534550IPR001554Glycoside hydrolase, family 14
PRINTSPR007504.5E-55551562IPR001554Glycoside hydrolase, family 14
PRINTSPR007504.5E-55569592IPR001554Glycoside hydrolase, family 14
PRINTSPR007504.5E-55607629IPR001554Glycoside hydrolase, family 14
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0048831Biological Processregulation of shoot system development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 688 aa     Download sequence    Send to blast
MNTNANTMNH CFAAAAQDLD PQPPPPPATS ISTQPYHTQP QPQRRLRGFA ATNSNSTATA  60
PIKSRKERDK EKERTKLRER HRRAITSRML AGLRQYGNFP LPARADMNDV IAALAREAGW  120
TVEPDGTTYR QTPPAPSMQP QSQPPPISHF NSIQQNNSNA SNVGVNPVRS VESPLYSGAL  180
RNCSVRSSVD CQPSTLRADE NLSPTSLDSV VAERDVKLDK YSSASAIDSL ECLKAGQLVQ  240
DVHCREHGNG LPETSYIPVY VRLATGSINN FCQLMDPEGV KEELQHLRSL NVDGVVVDCW  300
WGIVEAWTPK KYEWAGYREM FNIIREFGMK LQVVMAFHEY GGPDTGGIFI SLPQWVLEIG  360
KNNQDIFFTD REGRRNTECL SWGIDKERVL KGRTGIEIYF DFMRSFRTEF DDLFTEGLIS  420
AVEVGLGASG ELKYPSFSER MGWRYPGIGE FQCHDKYLLQ NLQRAAKLRG HSFWARAPDN  480
AGYYNSKPHE TGFFCDSGDY DSYYGRFFLH WYTQVLIDHA DNVLSLASLA FEDVQIVVKI  540
PAVYWWYKTS SHAAELTAGF YNPSNQDGYA PLFEVLKKHS VTMKFVISGF QASYPEIDEA  600
LSDPVGLNWQ VLNSGWDRGL TVAGQNAVPC YNRDGFMRLV ETARPRDHPD RRHFSFFVFQ  660
QPSPLIQRTI CFSEIDYFVK SMHGEVSN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1v3i_A1e-12525568510444Beta-amylase
1wdq_A1e-12525568510444Beta-amylase
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00543DAPTransfer from AT5G45300Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082155.10.0beta-amylase 8
SwissprotQ9FH800.0BAM8_ARATH; Beta-amylase 8
TrEMBLA0A4D9BKE80.0A0A4D9BKE8_SALSN; Uncharacterized protein
STRINGMigut.A00486.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA16072448
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45300.20.0beta-amylase 2
Publications ? help Back to Top
  1. Soyk S, et al.
    The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation.
    Plant Cell, 2014. 26(4): p. 1746-1763
    [PMID:24748042]