PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SMil_00000453-RA_Salv
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
Family Nin-like
Protein Properties Length: 331aa    MW: 37334.1 Da    PI: 6.9449
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SMil_00000453-RA_SalvgenomeNDCTCMView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK71.51.1e-22243291452
                 RWP-RK   4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                            +++l dl+kyF+lpi++AAke+++c++++K  CR+ G+kRWPhRkiks+
  SMil_00000453-RA_Salv 243 KMRLRDLAKYFHLPINAAAKEMKLCPSAIKSVCRKEGLKRWPHRKIKSI 291
                            7899*******************************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151916.608231311IPR003035RWP-RK domain
PfamPF020422.1E-19244291IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MADQISFAPQ HNHQHATGAI SSVEQLLFLD DDDGHGNPLL NDAVNGMIEE MSGDANYGTN  60
SPQFYSVHEN AVSNQTAQFA DLPPPPAFGN PMRVPVWPVP PSPYSCSCCQ TLREIFHVNG  120
SQVLKLGIHG RLWHISHAVL ERFDSKSSPE NHEYYMFDFC NESIGNVKQF LIQYCNDRKL  180
EGFIMLQDPL SNFYDALCTG CFHHHQSSQG DGHEGEVSRL EEEGNGVRLP KSYIASQRER  240
AGKMRLRDLA KYFHLPINAA AKEMKLCPSA IKSVCRKEGL KRWPHRKIKS IKNEIAKMSK  300
SINSADGSEK SRLAIEMQRL ERELGAFYQE K
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011081629.11e-126uncharacterized protein LOC105164634 isoform X1
TrEMBLA0A4D9AEB01e-154A0A4D9AEB0_SALSN; Uncharacterized protein
STRINGXP_006474671.16e-76(Citrus sinensis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA35052027
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76350.14e-12Nin-like family protein