PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SMil_00000453-RA_Salv | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia
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Family | Nin-like | ||||||||
Protein Properties | Length: 331aa MW: 37334.1 Da PI: 6.9449 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 71.5 | 1.1e-22 | 243 | 291 | 4 | 52 |
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +++l dl+kyF+lpi++AAke+++c++++K CR+ G+kRWPhRkiks+ SMil_00000453-RA_Salv 243 KMRLRDLAKYFHLPINAAAKEMKLCPSAIKSVCRKEGLKRWPHRKIKSI 291 7899*******************************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 16.608 | 231 | 311 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 2.1E-19 | 244 | 291 | IPR003035 | RWP-RK domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 331 aa Download sequence Send to blast |
MADQISFAPQ HNHQHATGAI SSVEQLLFLD DDDGHGNPLL NDAVNGMIEE MSGDANYGTN 60 SPQFYSVHEN AVSNQTAQFA DLPPPPAFGN PMRVPVWPVP PSPYSCSCCQ TLREIFHVNG 120 SQVLKLGIHG RLWHISHAVL ERFDSKSSPE NHEYYMFDFC NESIGNVKQF LIQYCNDRKL 180 EGFIMLQDPL SNFYDALCTG CFHHHQSSQG DGHEGEVSRL EEEGNGVRLP KSYIASQRER 240 AGKMRLRDLA KYFHLPINAA AKEMKLCPSA IKSVCRKEGL KRWPHRKIKS IKNEIAKMSK 300 SINSADGSEK SRLAIEMQRL ERELGAFYQE K |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011081629.1 | 1e-126 | uncharacterized protein LOC105164634 isoform X1 | ||||
TrEMBL | A0A4D9AEB0 | 1e-154 | A0A4D9AEB0_SALSN; Uncharacterized protein | ||||
STRING | XP_006474671.1 | 6e-76 | (Citrus sinensis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3505 | 20 | 27 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76350.1 | 4e-12 | Nin-like family protein |