PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_12621.1_g00001.1
Organism
Solanum melongena
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family BES1
Protein Properties Length: 1606aa    MW: 179782 Da    PI: 7.2255
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_12621.1_g00001.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF82253.97.6e-171402968
                   DUF822 29 iyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGtt 68
                             ++aGLR++Gn++lp+ a +n+Vl+AL+r+AGw ve+DGt+
  Sme2.5_12621.1_g00001.1  1 MLAGLRQYGNFPLPVPAAMNDVLAALARQAGWAVEPDGTV 40
                             79************************************96 PP
2DUF822531.5e-162192643377
                   DUF822  33 LRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.e 77 
                              L ++Gn++l +raD+n+Vl+AL+r+A w+ve+DGtt+r++  p  +
  Sme2.5_12621.1_g00001.1 219 LDSYGNFPLLVRADMNDVLAALARQADWTVEPDGTTFRQSPPPAnN 264
                              5579**********************************98877732 PP
3DUF822132.83.8e-4113051391391
                   DUF822    3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssa 86  
                               + rk+++kE+E++k+RER+RRai+++++aGLR++Gn++lp+raD+n+Vl+AL+r+AGw+ve+DGtt+r++  p   ++a + ++
  Sme2.5_12621.1_g00001.1 1305 KSRKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPVRADMNDVLAALARQAGWTVEPDGTTFRQSPPPA--SNASNVFR 1386
                               789*****************************************************************877666..55555555 PP

                   DUF822   87 saspe 91  
                               +++++
  Sme2.5_12621.1_g00001.1 1387 QRQQQ 1391
                               54443 PP
4DUF8221181.3e-3615071578273
                   DUF822    2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgs 73  
                               ++ ++++++E+E+ k+RER+RRai+++++a LR++Gn++lp+raD+n+Vl AL+r+AGw+ve+DGtt+r++ 
  Sme2.5_12621.1_g00001.1 1507 TTNKSRKEREKEQAKLRERHRRAITSRMLARLRQYGNFPLPVRADMNDVLTALARQAGWTVEPDGTTFRQSP 1578
                               678999***************************************************************763 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056878.4E-16139IPR008540BES1/BZR1 plant transcription factor, N-terminal
PfamPF056871.4E-18198275IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514456.84E-79282627IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.808.9E-73325617IPR013781Glycoside hydrolase, catalytic domain
PfamPF013739.3E-30326542IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.0E-10383405IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.0E-10476492IPR001554Glycoside hydrolase, family 14
PRINTSPR007505.0E-10506529IPR001554Glycoside hydrolase, family 14
PfamPF142237.1E-21749880No hitNo description
SuperFamilySSF566721.11E-4410001152No hitNo description
PfamPF056874.7E-4113051388IPR008540BES1/BZR1 plant transcription factor, N-terminal
PfamPF056873.6E-3615091588IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 1606 aa     Download sequence    Send to blast
MLAGLRQYGN FPLPVPAAMN DVLAALARQA GWAVEPDGTV PPLDNLLFLS NVVSIVPSDR  60
IYVRRRLSKG GTIGLNGPTS LASKSSKDIV YISTNRKWEI PVLTESSKHS ARNCSRTDGF  120
WQHQQQCFQR RSHGDDEVGD VIGAEEVDSG LDHHLVLEIG DPDLGPNHIP NLTVPMASRP  180
ETLPLPLPEL QIRAGKRERR NERSFGNVTG EQLRAKCLLD SYGNFPLLVR ADMNDVLAAL  240
ARQADWTVEP DGTTFRQSPP PANNASNVLM QELHCGEHGS SFSETQYVPI FVMLSSGVIN  300
NFCQLMDPDG VKQELQQLKS LKIDGKDNQD IFFTGCQGRR NRECLSWGID KERVYFDLMR  360
SYRTEFDDLF TEGLISAVVI GLGASGELKY PSFSERMGWR YPESSKRCYI RGHTFWAKGP  420
DNAGYYNSKP HETGFFCERG DYDSYYGRFF LHWYRQVLID HADNVLSLAT LAFEGIQVVV  480
KIPAIYWWYR TSSHAAELNP TNQDGYSPVF DVLKKHSVTI KFESTGLQVS ETDGALADPE  540
GLSWQHGIRR LMLLVRMHFH VTIREELMRL VETAKPRNDP DRHHFSFFAF QQPSPLVQSA  600
VSFPELNYFI KCMHGEEGVP RKQPFYFYEV VVRSAYILPS PDSTCEISLG VVVVVVVVGV  660
GEEEIGENSH EQSENSTGSN SNVVVQFNPV SQLPVKLVGS NNFPTWKAQI SMLMCRHDLF  720
DHLDCFSPAP VSTITQNNRE VVNPAYCFWF RQDQLIHNAI RASVDPTIAS TVLTASTAKL  780
AWDSLYLTYA NKFQTQIFSL RDQFARLSMD SRSVADYLHQ VGSIYNELAT VGAAVTNDEL  840
IVKILSGLGK DFSEISTAIR AGDSIISYDK LYAKLINYEL NGPIRKGLVR DEPDIVTTDQ  900
LAIYSTCCTQ ILQCFLPYIF STLSHTDVPY EGPAFYAAVS MSKPRKSKGK GKEVEVVVGL  960
ASKVRQRNEA QDESLSQTSP APLAPDELDS SEILPEPPIE SAKCFSKIDL GSGYHQVRVK  1020
EKDIPKIAFR TQYAFLGHIV SNEGIRVDSQ MIETVKDWPR PTTPMEVWSF LGLTGYYRRF  1080
VEGFSSISIP LTKLTHKITK FQWNNVYGRS FQELEDKLTS APVLVLPEGT EGYAVYCDAS  1140
GIGLGCVLTQ HGKIQVLVDL LSRSTRYPAV VTKVQVGSPE PYRQRVPVRP NGIWGVTELF  1200
LKHKELKKEL EYLLQRSLTT SLPIPIITLF VDPTITHNDT LTIVQMLLHN GVPPIIRFAI  1260
SYATDKNDDP NPNQPLQPRS HPQPRRPRGF AATNAAAPAA GTTNKSRKER EKEKERTKLR  1320
ERHRRAITSR MLAGLRQYGN FPLPVRADMN DVLAALARQA GWTVEPDGTT FRQSPPPASN  1380
ASNVFRQRQQ QRFQRRSHGN GEVGDVIGAE EVDSGLNHHL GWEIGDPDLG YSKCGDGDPT  1440
QGRKQINEDF ETMSNPHPHH HISNTQDLDP QFPNPNDDPS PNPSLHPQPR RPHGFATGNA  1500
VAVAAGTTNK SRKEREKEQA KLRERHRRAI TSRMLARLRQ YGNFPLPVRA DMNDVLTALA  1560
RQAGWTVEPD GTTFRQSPPL ANNASNVVSI IPCDRIYVST FAFTAG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1bya_A3e-42325531115350BETA-AMYLASE
1byb_A3e-42325531115350BETA-AMYLASE
1byc_A3e-42325531115350BETA-AMYLASE
1byd_A3e-42325531115350BETA-AMYLASE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754471e-130HG975447.1 Solanum pennellii chromosome ch08, complete genome.
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45300.11e-114beta-amylase 2