PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_05202.1_g00002.1
Organism
Solanum melongena
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family ERF
Protein Properties Length: 412aa    MW: 46119 Da    PI: 5.1849
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_05202.1_g00002.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.45.5e-16113159353
                      AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 
                               kGVr +k +g+++AeIrdps+    kr++lg+f t e Aa+a++a r ++
  Sme2.5_05202.1_g00002.1 113 PKGVRMRK-WGKYAAEIRDPSQ---GKRIWLGTFETVEAAAQAYEAKRAEF 159
                              59****99.**********964...3********************99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103217.477112172IPR001471AP2/ERF domain
PfamPF008471.2E-9113159IPR001471AP2/ERF domain
PRINTSPR003675.3E-7113124IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-15114159IPR016177DNA-binding domain
SMARTSM003801.4E-13114168IPR001471AP2/ERF domain
CDDcd000181.12E-18114154No hitNo description
Gene3DG3DSA:3.30.730.106.0E-19114156IPR001471AP2/ERF domain
PRINTSPR003675.3E-7135151IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    Send to blast
MNWIPKELIS SDMYKLEKNV KRERGGCINS VRKVRIVYDD PDATDDSESD DDQNVRVDKN  60
GVRIKRVVKE VVLPGVSCEN NCDKCSKLDG IRMKKLKKIL ENKKVQLKSR ALPKGVRMRK  120
WGKYAAEIRD PSQGKRIWLG TFETVEAAAQ AYEAKRAEFD RTISLRKGEN LSSVAAPAES  180
YKAKNGTNRL YSHPSPSSVL DVPTSSAAAP LESNDNPMRD VAQMPDSGCE EFNSRFFEDQ  240
MLHEFVDRGR QGILELMEDP LIQQGSISNS LAEMTEVNIR KKTEAKPTIA SCTNSTKGIE  300
DRHNDQSIFS VLDKPLTMSP INPELLNLNI EETAAAGNNL KLLGFDDNAL LDKDCSQTFE  360
SYTDGIGLDS HFHSCDGSSE CVYCKLFAEE VDLRWLDELL LEAQSAPQVR VS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015068523.10.0ethylene-responsive transcription factor ERF118
TrEMBLM1A4290.0M1A429_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000143580.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA127181519
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.22e-11ERF family protein