PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_02031.1_g00001.1
Organism
Solanum melongena
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family BES1
Protein Properties Length: 354aa    MW: 38421 Da    PI: 8.3905
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_02031.1_g00001.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822205.21.9e-63311731148
                   DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssa 86 
                              ++++r ptwkErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp e++++ g s 
  Sme2.5_02031.1_g00001.1  31 TSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCKEAGWIVEEDGTTYRKGCKPVERMDI-GGSV 115
                              5899************************************************************************77775.6689 PP

                   DUF822  87 saspesslqsslkssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvss 148
                              s+sp+ss+q         sp +sy++sp sss+psp+s+  +++ ++    +sl+p+l++ls+ ss
  Sme2.5_02031.1_g00001.1 116 SVSPCSSYQ--------LSPGASYNPSPVSSSIPSPVSSHYVTNVQNnsdpNSLIPWLKNLSSGSS 173
                              9********........677777777777777777777665544433456699*******998443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056877.8E-6532169IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    Send to blast
FWQARSRPKP VENLIWSFKS SIAENGGVVM TSGTRLPTWK ERENNKRRER RRRAIAAKIF  60
AGLRMYGNYK LPKHCDNNEV LKALCKEAGW IVEEDGTTYR KGCKPVERMD IGGSVSVSPC  120
SSYQLSPGAS YNPSPVSSSI PSPVSSHYVT NVQNNSDPNS LIPWLKNLSS GSSPSSSKFP  180
HHLCIPGGSI SAPVTPPLSS PTARTPRISD NWENPTANST WIQQHYPFLP SSTPPSPGPQ  240
TPPDSGWLSG VQTPQDVPSS PTFSLVSSNP FGFKEPLSNG GSRMWTPGQS GTCSPAVGPC  300
MDQTADVPMS DVISAEFAFG SNMKGVVKPW EGERIHEECI TDDLELTLGN SSTR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A7e-2435106372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B7e-2435106372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C7e-2435106372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D7e-2435106372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754410.0HG975441.1 Solanum pennellii chromosome ch02, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006358089.10.0PREDICTED: BES1/BZR1 homolog protein 4 isoform X2
RefseqXP_006358090.10.0PREDICTED: BES1/BZR1 homolog protein 4 isoform X3
SwissprotQ9ZV881e-128BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A0V0I4Y20.0A0A0V0I4Y2_SOLCH; Putative BES1/BZR1 protein 4-like
STRINGPGSC0003DMT4000732500.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19842464
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-114BES1/BZR1 homolog 4