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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_01956.1_g00002.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
AP2 |
Protein Properties |
Length: 533aa MW: 58967.3 Da PI: 7.4635 |
Description |
AP2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_01956.1_g00002.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 26.3 | 1.9e-08 | 198 | 247 | 8 | 55 |
AP2 8 wdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
+++++gr++A+++d ++n+ ++k+ g ++ +e Aa+a++ a++k++g
Sme2.5_01956.1_g00002.1 198 RHRWTGRYEAHLWDkSTWNQnQNKKGKQGAYDEEEAAARAYDLAALKYWG 247
799***********66667777755555********************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 533 aa
Download sequence Send
to blast |
MASPTAKTEG DVGGGETSEH IGTDQLLLYR GLKKAKKERG YTAKERISKM PPCTAGKRSS 60 IYRGVTRYDM EIADCSDVLV SSFLLPDFFY GGIAIKPTPS SLLYLLPPHG SSCADQSSPD 120 SSYICACVDV CELLLFSNIF FSAMSLGHSK ATYISESKGF AIWVELVAPG LPSAGYLSYA 180 VCEQLYRSGG FTLYAPKRHR WTGRYEAHLW DKSTWNQNQN KKGKQGAYDE EEAAARAYDL 240 AALKYWGPGT LINFPVTDYT RDLEEMQNLS REDYLASLRR KSGGFSRGIS KYRSLSSRWD 300 LQFSRVPGAD YFNSLHYGDN ATVDNEYIGG FCMDRKIDLS SYIKWWGGNK ARQTDSQPKM 360 SEETKVGCPE DIDNELRASE LSVQQTEPYE MPRLGGVYQE KKNHKSSTSA MSILSQSAAY 420 KSLLEKVAKK KEKVETDENE NKSTINTVDR GKMIEKSSPD SGSEGLGAAF INAGGLSINR 480 NLHPLTPLLS APLLTNYNSI DPLTDPNLWT SLVPNFHTGS SRTAEVGLSL IKA
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |