PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Solyc11g020950.1.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family | bZIP | ||||||||
Protein Properties | Length: 327aa MW: 37188.9 Da PI: 8.121 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 24.9 | 4.5e-08 | 186 | 221 | 15 | 50 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 15 eAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 +A rsR RK++ i+eLe+ v++L+ae ++L ele Solyc11g020950.1.1 186 QSAHRSRVRKLQHIAELERTVQALQAEGSELSAELE 221 69******************************9998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.2E-5 | 177 | 236 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 1.04E-13 | 177 | 228 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 4.1E-8 | 186 | 230 | No hit | No description |
SuperFamily | SSF57959 | 1.06E-6 | 186 | 230 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 327 aa Download sequence Send to blast |
MDSTSPFLQS YVDSNMDGSN GKAKPTEGSS HHHRWNSESI LIEEQPSWLD DLLNEPPETT 60 TVVHKGHRRS ASDTFAYVGA AAERLDTWEE PKNKNVNVGA SWGSVNYVSY KDLSAVPYEP 120 KPNSSHEQKF NKAAQELNGA PSVSHEKHNL REINNSKNQE GSNERSNNAQ AKHSMSKADA 180 KRAKQQSAHR SRVRKLQHIA ELERTVQALQ AEGSELSAEL EFVDQQNIIL SMENRALRQR 240 LDSLSQEQLI KHLEQEMLER ELTRLQTMYQ MQRQQMQQQH QQPQQQNHSK HRRNKSRDLE 300 AQLANLSIKN NEANSSRAQV TGSVRM* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Solyc11g020950.1.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004250425.1 | 0.0 | uncharacterized protein At4g06598-like | ||||
Refseq | XP_019066409.1 | 0.0 | uncharacterized protein At4g06598-like | ||||
TrEMBL | A0A3Q7JKV2 | 0.0 | A0A3Q7JKV2_SOLLC; Uncharacterized protein | ||||
STRING | Solyc11g020950.1.1 | 0.0 | (Solanum lycopersicum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA11445 | 20 | 23 | Representative plant | OGRP4252 | 12 | 19 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G58110.2 | 6e-55 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Solyc11g020950.1.1 |
Publications ? help Back to Top | |||
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