PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Solyc07g045000.2.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family | G2-like | ||||||||
Protein Properties | Length: 177aa MW: 19954.8 Da PI: 5.5191 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 26.6 | 1.4e-08 | 1 | 19 | 36 | 54 |
G2-like 36 mkvkgLtlehvkSHLQkYR 54 m vkgL ++hvkSHLQ+YR Solyc07g045000.2.1 1 MAVKGLKISHVKSHLQMYR 19 89***************** PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.8E-7 | 1 | 21 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence Send to blast |
MAVKGLKISH VKSHLQMYRN LKERGNLNMV RSVNNFHEET PQFSWSSPQH VCEALLEHGP 60 SKSSKQIDPG SDKLPNYKAI INAYIAENNI YCYDYQEAQG SLSSGMTKEE EDDDGGGGGG 120 PSSEIYEFSH EREINFWPLN DYNHQNSQYD SSKKQVLNST KDNSHINLDL SISSYF* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Les.8404 | 0.0 | callus |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Solyc07g045000.2.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010323925.1 | 1e-129 | uncharacterized protein LOC101246548 isoform X2 | ||||
TrEMBL | A0A3Q7HA81 | 1e-127 | A0A3Q7HA81_SOLLC; Uncharacterized protein | ||||
STRING | Solyc07g045000.2.1 | 1e-129 | (Solanum lycopersicum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA9459 | 13 | 25 |
Link Out ? help Back to Top | |
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Phytozome | Solyc07g045000.2.1 |
Publications ? help Back to Top | |||
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