PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Seita.9G075300.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family | bZIP | ||||||||
Protein Properties | Length: 203aa MW: 22109.2 Da PI: 11.5468 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 38.2 | 3.2e-12 | 79 | 130 | 1 | 52 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 e++++r+rrk++NR++ArrsR+RK++++eeL+ ++ L ae+++L +l l Seita.9G075300.1.p 79 EERRRRQRRKESNRLSARRSRERKQQRLEELRGDAARLRAERQQLEARLRGL 130 6889******************************************999876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.6E-9 | 75 | 130 | No hit | No description |
SMART | SM00338 | 6.0E-5 | 77 | 153 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 9.0E-8 | 79 | 130 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.047 | 81 | 131 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.53E-7 | 83 | 128 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 86 | 101 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 8.44E-12 | 90 | 131 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence Send to blast |
MLSVQEALDL DFGAASSSCG SRDLLGMDII TCGFTPWGPD TCPSLDQVLA SSRTSPAAPV 60 RGREEEEEEA AAPGEEQEEE RRRRQRRKES NRLSARRSRE RKQQRLEELR GDAARLRAER 120 QQLEARLRGL SVRGAANARL RAEAAALARR LRVARGRLLA LRRLAAAHAL PRAQPPMVPP 180 LVQQQAAGVA PPAPLGLASL MT* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 80 | 88 | RRRRQRRKE |
2 | 95 | 102 | RRSRERKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Seita.9G075300.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004986220.1 | 7e-85 | ocs element-binding factor 1-like | ||||
TrEMBL | A0A368SE94 | 1e-134 | A0A368SE94_SETIT; Uncharacterized protein | ||||
STRING | Sb01g006850.1 | 2e-52 | (Sorghum bicolor) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP13845 | 24 | 29 |
Link Out ? help Back to Top | |
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Phytozome | Seita.9G075300.1.p |