PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Seita.7G221700.1.p | ||||||||
Common Name | SETIT_011735mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family | WRKY | ||||||||
Protein Properties | Length: 473aa MW: 49408.2 Da PI: 5.513 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.9 | 6.7e-31 | 232 | 290 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ Seita.7G221700.1.p 232 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRNDPNMLVITYTSEHNHP 290 699************************998****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 32.822 | 226 | 292 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 7.6E-31 | 229 | 292 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.96E-26 | 229 | 292 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.2E-37 | 231 | 291 | IPR003657 | WRKY domain |
Pfam | PF03106 | 7.3E-26 | 233 | 290 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009555 | Biological Process | pollen development | ||||
GO:0009793 | Biological Process | embryo development ending in seed dormancy | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 473 aa Download sequence Send to blast |
MCDYFLQRME GDQAGGDLTD IVRAGGAMPG SAEVPSTAAE WQLQGEPTML FPPPPSSSDG 60 CAGGAGGGAD VFGDPFAGLG DPFSSDYASG ADFLDAMPDA MAKVGFDTAV GGSGGGGGGG 120 GQLMDMSRKP FLPRGLQQMP AVGVLAPRVL PSPLSPRAIR PYPALAGDMV KLGITAGQVA 180 GCAIDAAVVG MQMSSPRAAG GIKRRKNQAR KVVCIPAPTA AGGRPTGEVV PSDLWAWRKY 240 GQKPIKGSPY PRGYYRCSSS KGCSARKQVE RSRNDPNMLV ITYTSEHNHP WPTQRNALAG 300 STRNHHGKNS SGSSSGSKSS QNEKQQQPNV KEEPKDPATT TTTSTITTTT STSPVAAVKE 360 EALAGSSEAL GRVMDAAVVD HNIELMDQVF SESYKPMIPE AGHSDDFFSD LAELESDPMS 420 LIFSKEYMEA KPSGGGDRAQ EKAITKDLDP FDMLDWSTTS SAASSFEQGK RG* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 2e-24 | 206 | 293 | 2 | 80 | Disease resistance protein RRS1 |
5w3x_D | 2e-24 | 206 | 293 | 2 | 80 | Disease resistance protein RRS1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Seita.7G221700.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022683942.1 | 0.0 | probable WRKY transcription factor 14 | ||||
TrEMBL | K3YBZ1 | 0.0 | K3YBZ1_SETIT; Uncharacterized protein | ||||
STRING | Si011735m | 0.0 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2592 | 38 | 88 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34830.1 | 1e-66 | WRKY DNA-binding protein 35 |
Link Out ? help Back to Top | |
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Phytozome | Seita.7G221700.1.p |