PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Seita.5G356200.2.p | ||||||||
Common Name | LOC101780708, SETIT_002173mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family | bZIP | ||||||||
Protein Properties | Length: 334aa MW: 36026.4 Da PI: 9.1579 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 48.7 | 1.6e-15 | 263 | 311 | 5 | 54 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lk + +el+k Seita.5G356200.2.p 263 RRQKRMIKNRESAARSRARKQAYTNELENKVSLLEEENERLK-RQKELEK 311 79***************************************9.5566655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 5.4E-15 | 257 | 310 | No hit | No description |
SMART | SM00338 | 7.1E-11 | 259 | 327 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.588 | 261 | 306 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.36E-25 | 263 | 317 | No hit | No description |
SuperFamily | SSF57959 | 2.31E-11 | 263 | 308 | No hit | No description |
Pfam | PF00170 | 8.7E-13 | 263 | 306 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 266 | 281 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 334 aa Download sequence Send to blast |
MGSQTMASKA GGGGGGGGGG GGAGAAQRGQ MQNLSRQGSL YNLTLDEVQS HLGEPLHSMN 60 LDELLKSVFP DGLEHDGGTT SQYEQTSGLL RQGSITMPPE LSKKTVDEVW KGIQDAPKRN 120 VTEGGRRRRE RQPTLGEMTL EDFLVKAGVV TQGYLKDLND VGNVEQVGSA GVSGLTAGAQ 180 WLDRYQQQIT AIEPHQHGQH GVPGAYMPSQ LALQPLNVGP GAILESYSDG HITSPMMGAL 240 SDSPTPGRKR GAPGDVADKL MERRQKRMIK NRESAARSRA RKQAYTNELE NKVSLLEEEN 300 ERLKRQKELE KILFSAPLPE PKYQLRRTGS ATF* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 124 | 131 | GRRRRERQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00409 | DAP | Transfer from AT3G56850 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Seita.5G356200.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004970325.1 | 0.0 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
Refseq | XP_022682969.1 | 0.0 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
Swissprot | Q9LES3 | 1e-83 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | K3XJV0 | 0.0 | K3XJV0_SETIT; Uncharacterized protein | ||||
STRING | Si002173m | 0.0 | (Setaria italica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56850.1 | 5e-85 | ABA-responsive element binding protein 3 |
Link Out ? help Back to Top | |
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Phytozome | Seita.5G356200.2.p |
Entrez Gene | 101780708 |
Publications ? help Back to Top | |||
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