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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Seita.3G266500.1.p |
| Common Name | SETIT_024587mg |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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| Family |
GRAS |
| Protein Properties |
Length: 395aa MW: 42958.2 Da PI: 6.8527 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Seita.3G266500.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 256.2 | 1.2e-78 | 4 | 387 | 8 | 374 |
GRAS 8 cAeavssgdlelaqalLarlsel..aspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalklfsevsPilkfsh 95
c++a+++g+ ++++a L +s+l a+ +gdp+qR+a+ f+eAL +r ++ + ++l+ l + ++ + + aa++ f ++P+l+++
Seita.3G266500.1.p 4 CVTALDAGNIAAVNADLLAMSHLalAACNGDPTQRVAFAFAEALGRRALQsTLPGLSWGLGLQLVQQPAPQYADAARRCFDALCPFLRVAA 94
99********************988999*****************998885889999998777777667777778999************* PP
GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLa.sRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl..va 183
+aNq+I+ a++ e++vH++D++ + QW+ Ll+ ++ +Rpeg+p lR+ +v++ ++ l++t+ L++ A +l+vpf fn++ +
Seita.3G266500.1.p 95 SAANQTIVTAMAAEKHVHVVDLGGASPNQWLDLLRLFTaARPEGAPVLRLSVVSE----QEAFLSRTAGLLTQEAVRLHVPFIFNPVrsHI 181
*************************************779***************....99*************************98888 PP
GRAS 184 krledleleeLrvkpgEalaVnlvlqlhrlldesvsles........erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysa 266
+r+++ ++ +L v+ gEal++ + lqlhrl ++++s++ + d++L+++ +lsPk++ ++eqeadhn++s+ +r+++a++yy+a
Seita.3G266500.1.p 182 DRFSAPDIAALGVHLGEALVITSTLQLHRLIADETSVQLpagphqmtKADALLRVLCDLSPKLMLLTEQEADHNGASLWDRVSNAFNYYVA 272
899999*************************6655544333444444599***************************************** PP
GRAS 267 lfdsleak..lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsek.aakqaklllrkvksdg...yrv 351
lf+ lea+ +pres +r+ vEr ll++ei+++va g++rrerhe++++W +r++ aGFkp+p+ ++ ++a l + + dg y v
Seita.3G266500.1.p 273 LFNDLEAGggAPRESVDRAAVERLLLREEIMDIVARDGSSRRERHESMKRWAQRMGVAGFKPAPVMSYdQFEDAGLQALQLAADGtlrYWV 363
*****665449****************************************************9865515556655555555677778999 PP
GRAS 352 eeesgslv.lgWkdrpLvsvSaWr 374
+e++s++ ++ + p++sv+aWr
Seita.3G266500.1.p 364 RNEDASIIsIYSRMTPIFSVTAWR 387
99999999899999*********8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 395 aa
Download sequence Send
to blast |
MQYCVTALDA GNIAAVNADL LAMSHLALAA CNGDPTQRVA FAFAEALGRR ALQSTLPGLS 60
WGLGLQLVQQ PAPQYADAAR RCFDALCPFL RVAASAANQT IVTAMAAEKH VHVVDLGGAS 120
PNQWLDLLRL FTAARPEGAP VLRLSVVSEQ EAFLSRTAGL LTQEAVRLHV PFIFNPVRSH 180
IDRFSAPDIA ALGVHLGEAL VITSTLQLHR LIADETSVQL PAGPHQMTKA DALLRVLCDL 240
SPKLMLLTEQ EADHNGASLW DRVSNAFNYY VALFNDLEAG GGAPRESVDR AAVERLLLRE 300
EIMDIVARDG SSRRERHESM KRWAQRMGVA GFKPAPVMSY DQFEDAGLQA LQLAADGTLR 360
YWVRNEDASI ISIYSRMTPI FSVTAWRPAK KNGK*
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