PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Seita.3G198400.1.p | ||||||||
Common Name | SETIT_022639mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family | bZIP | ||||||||
Protein Properties | Length: 329aa MW: 35423.8 Da PI: 5.2779 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 50.7 | 3.9e-16 | 258 | 301 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lkk+ Seita.3G198400.1.p 258 RRQKRMIKNRESAARSRARKQAYTNELENKVSLLEEENERLKKQ 301 69***************************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 4.8E-15 | 253 | 301 | No hit | No description |
SMART | SM00338 | 3.4E-12 | 254 | 326 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.542 | 256 | 301 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.5E-14 | 258 | 301 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.75E-12 | 258 | 303 | No hit | No description |
CDD | cd14707 | 2.49E-25 | 258 | 303 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 261 | 276 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 329 aa Download sequence Send to blast |
MIQAMASQAG GGGGGDAGSA QRGQIQGLAR QGSLYSLTLD EVQNHLGEPL LSMNFDDLLK 60 TVFPDGVDPN GPVIGKPDPA SSLQRQGSIV MPPQLSKKTV DEVWKGIQDG PETSAREGGQ 120 HRRERQPTLG EMTLEDFLVK AGVVPEGLMR DSDDFLVNMD TVGSNVMVAG TSSLNPGAQL 180 LQQYQQQALE SQQPSLVGSY MAGQLAPQPL SVATGAMLDS MYSDGQITSP TLGAFSDPQT 240 PGRKRGVSGE VVDKVIERRQ KRMIKNRESA ARSRARKQAY TNELENKVSL LEEENERLKK 300 QKEFGEIMSS APPPEPKYQL RRTSSSAL* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Seita.3G198400.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT061345 | 0.0 | BT061345.1 Zea mays full-length cDNA clone ZM_BFb0137L05 mRNA, complete cds. | |||
GenBank | EU966389 | 0.0 | EU966389.1 Zea mays clone 294076 bZIP transcription factor mRNA, complete cds. | |||
GenBank | KJ726913 | 0.0 | KJ726913.1 Zea mays clone pUT3458 bZIP transcription factor (bZIP96) mRNA, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004961686.1 | 0.0 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X3 | ||||
Swissprot | Q9LES3 | 2e-79 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | K3Z7W9 | 0.0 | K3Z7W9_SETIT; Uncharacterized protein | ||||
STRING | Si022639m | 0.0 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2707 | 38 | 83 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56850.1 | 5e-80 | ABA-responsive element binding protein 3 |
Link Out ? help Back to Top | |
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Phytozome | Seita.3G198400.1.p |
Publications ? help Back to Top | |||
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