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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Seita.3G189300.1.p |
| Common Name | SETIT_022117mg |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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| Family |
GRAS |
| Protein Properties |
Length: 429aa MW: 45515.5 Da PI: 6.424 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Seita.3G189300.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 259.9 | 8.8e-80 | 35 | 425 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetsekn.sseelaalkl..fsevs 88
++lLl+cA a++s+d +laq++++ l+++as++gdp+qRl++ +++AL ar r +l++ +++e++ + ++++++++l +++++
Seita.3G189300.1.p 35 QQLLLHCAAALESNDVTLAQQAMWVLNNIASSQGDPNQRLTSWLLRALVARACR---QLCAPAgTTQEAAAVRpRERAVSVTELaeYVDLT 122
699**************************************************9...44444413333333333334444444467***** PP
GRAS 89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg...skeeleetgerLakfAeelgvp 175
P+++f++ + N+aIl+av+g+ +vH++D++++ ++QWp+L++ L++Rp+gpp lRiT+ ++ ++ ee+g rLa+fA++ gv+
Seita.3G189300.1.p 123 PWHRFGFTASNSAILRAVAGSAAVHVVDLGVTRCMQWPTLIDMLSKRPGGPPaLLRITVPSARPTVpplLGVPDEELGVRLANFAKSKGVR 213
************************************************8888789***99986666877777789**************** PP
GRAS 176 fefnvl...................vakrledl.....eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvv 242
+efnv +++l ++ +L+++ gEal+Vn++ + ++ + rd++L++v+ l+P +v+v+
Seita.3G189300.1.p 214 LEFNVAgkgtgtspasspekaaaaaP---CQNLasvlsDPPSLALRDGEALVVNCQSWIRHVA------PGSRDAFLDAVRALNPCLVTVT 295
****999999*999999998874442...33334446789999**************999997......555788**************** PP
GRAS 243 eqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsek 332
+++ad++s+s++ r+ +l++++ lfd+l++++pr+s r+ E++ +gr+i++vv + a er e+ ++ er+++ GF v+++e+
Seita.3G189300.1.p 296 DEDADLDSPSLASRIEGCLNFHWILFDALDTSAPRDSPRRAEHEAA-VGRKIESVVGADDAGgGAERSESGARLAERMRRNGFAGVAFDEE 385
********************************************99.*********998887689************************** PP
GRAS 333 aakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
+a ++++ll++++ g+ v+ e++ lvl Wk++ v +SaW
Seita.3G189300.1.p 386 TAGEVRRLLSEHA-TGWGVKREEDMLVLNWKGHGAVYTSAW 425
*************.99************************* PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 429 aa
Download sequence Send
to blast |
MEQEMRTAAS GGGSGLRAHS SVCFSGALID GPRIQQLLLH CAAALESNDV TLAQQAMWVL 60
NNIASSQGDP NQRLTSWLLR ALVARACRQL CAPAGTTQEA AAVRPRERAV SVTELAEYVD 120
LTPWHRFGFT ASNSAILRAV AGSAAVHVVD LGVTRCMQWP TLIDMLSKRP GGPPALLRIT 180
VPSARPTVPP LLGVPDEELG VRLANFAKSK GVRLEFNVAG KGTGTSPASS PEKAAAAAPC 240
QNLASVLSDP PSLALRDGEA LVVNCQSWIR HVAPGSRDAF LDAVRALNPC LVTVTDEDAD 300
LDSPSLASRI EGCLNFHWIL FDALDTSAPR DSPRRAEHEA AVGRKIESVV GADDAGGGAE 360
RSESGARLAE RMRRNGFAGV AFDEETAGEV RRLLSEHATG WGVKREEDML VLNWKGHGAV 420
YTSAWMPN*
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