PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Seita.2G426400.3.p | ||||||||
Common Name | LOC101759545, SETIT_031399mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 108aa MW: 12057.7 Da PI: 7.3685 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 21.9 | 3.7e-07 | 23 | 65 | 21 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 21 RqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 R ++ e+L +vkeL++ +L +++++lk+ev++ +s+v Seita.2G426400.3.p 23 RHPRLSGFEQLDARVKELTSSQAELLERIQKLKQEVQNWRSNV 65 555666789****************************998876 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 6.5E-4 | 23 | 66 | No hit | No description |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 108 aa Download sequence Send to blast |
MAAESTAPPP PSLPPPATAA ALRHPRLSGF EQLDARVKEL TSSQAELLER IQKLKQEVQN 60 WRSNVETQVR TCQNELQGLK KGLDSEVEQL KLEMKEIRSA IQKEKEQ* |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Seita.2G426400.3.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | |||
GenBank | EU964185 | 2e-85 | EU964185.1 Zea mays clone 276545 hypothetical protein mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_004958639.1 | 3e-71 | uncharacterized protein LOC101759545 isoform X2 | ||||
TrEMBL | A0A368Q996 | 7e-70 | A0A368Q996_SETIT; Uncharacterized protein | ||||
STRING | Si031399m | 8e-70 | (Setaria italica) |
Link Out ? help Back to Top | |
---|---|
Phytozome | Seita.2G426400.3.p |
Entrez Gene | 101759545 |