PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 676783408
Organism
Sisymbrium irio
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
Family B3
Protein Properties Length: 2350aa    MW: 265002 Da    PI: 8.7147
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
676783408genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.32.1e-111652352598
                TT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
         B3  25 ehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                ehg+ ke++  +tl  ++g +   +l  r ++g++ l+kGWk+F+ angLk+gD++++++++ +++++++++f 
  676783408 165 EHGSFKEGHLFITLSGKNGTKLVANL--RESRGSMRLGKGWKDFAIANGLKAGDSFTLEVIW-KDKTPMLSLFG 235
                55666677778999999*********..*********************************9.88889998886 PP
2B347.24e-153584371193
                HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
         B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                lk g  +lp  f++++g++k+  +++tl  +++r+W  +l+ ++ksg++ l+kGW eF+kangLk g ++++  +++ +++++
  676783408 358 LKFGKQYLPLWFTRKNGLDKP--RKITLLGKDSRKWVAELRQENKSGGFRLGKGWIEFAKANGLKIGNSFTLDSIWE-NETPM 437
                4446679************65..58***********************************************98885.44455 PP
3B340.64.6e-13486565386
                EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
         B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                + ++++   k + l+lp +f+++++++k +  ++tl  ++g +W  +l    k+g ++++ G k+F++ang+++g++++++++g
  676783408 486 SLTLTPEDVKDCELILPSQFMKDNDINKLG--KITLLGKKGTKWFGYL--LTKDGIVTMGCGLKGFCEANGVETGESFILEFIG 565
                5566777778899***********999765..8***********9999..999999************************9765 PP
4B3551.5e-17775863698
                ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
         B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                + +   +++rl+lp +f +e+g++k++  ++ l   +g +W  +l    ++gr++ ++GWk+FvkangLk g + +++l++ +++++v+ ++ 
  676783408 775 LAPVDVRHCRLRLPMQFSRENGINKPG--KIYLLGNDGSKWLANL-LLESRGRMTVGDGWKSFVKANGLKIGGSYTLELNW-EDTTPVLCLCP 863
                55667789**************99776..8***************.6777788899***********************99.88889999886 PP
5B365.57.8e-219291023199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
         B3    1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98  
                 f++ ++++d+l++grl+lp +f++e++++k++  ++tl  ++g +W   l    ++gr+ l+kGWk+F+kangLk+gD+++++ ++ ++ ++v++++r
  676783408  929 FLTLTITPDSLRHGRLRLPLEFMTENSMNKPG--DITLLGKDGAKWLASLL-LERRGRMCLGKGWKDFAKANGLKTGDSITLESIW-EDSTPVLSLLR 1022
                 778899********************999766..7***************6.55556778***********************999.77778999888 PP

                 S CS
         B3   99 k 99  
                 +
  676783408 1023 T 1023
                 6 PP
6B360.62.7e-19125313361198
                 HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
         B3   11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98  
                  +++rl+lp +f++++g++k++  ++ l  ++g +W  +l    ++gr++l++GWk+FvkangLk+gD++ +k+++ +++++v++++ 
  676783408 1253 VRNCRLRLPMQFTRDNGINKPG--KVYLLGKDGSKWLANL-LLESRGRMTLGDGWKSFVKANGLKTGDSFGLKVNW-EDTTPVLSLCP 1336
                 5789*************99776..8***************.68888899************************988.89999999986 PP
7B360.52.9e-1914061498197
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
         B3    1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97  
                 f++ ++++d+l++grl+lp +f+ +++++k++  ++tl  ++  +W v l    ++gr+ l+kGWk+F+kan+Lk+gD+++++ ++ +++ +v++++
  676783408 1406 FLTLTITPDSLRHGRLRLPLQFMMDNSMNKPG--DITLLGKDDVKWLVSLL-LERRGRMSLGKGWKDFAKANRLKTGDSITLESIW-EDEIPVLSLV 1498
                 778899********************999766..7***************5.55556789***********************998.5554666655 PP
8B351.71.6e-1615591639489
                 E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
         B3    4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89  
                 +ltp+dv ++++l lp +f++++g++k++  ++t+  +sg +W  ++     +g++ l++GWk+F++ang+ +g+++v++l+ +++
  676783408 1559 TLTPEDV-RNCNLHLPSQFMRANGIIKPG--KITMLGRSGMKWFAYV--LSEDGTVALGNGWKGFCEANGVMVGESFVLELIPNED 1639
                 4555555.5677*************9776..7***************..99999**************************996655 PP
9B333.29.2e-11164217131694
                 EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
         B3   16 lvlpkkfaeeh..ggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94  
                  ++p +f++++  gg+  e+ + +l++ +s  +W+vk+      ++ +l++GW+eF+ an+L+ g +v+ +++g++ f  +v
  676783408 1642 HMIPSDFFSKYieGGS-VEK-KAVLKSdSSDITWKVKM------NGPILSDGWREFAMANNLQIGGVVLVRYEGDMVF--HV 1713
                 48**********7444.343.4555553888*******......4569************************999888..54 PP
10B341.13.1e-1318311921197
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
         B3    1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97  
                 f++ ++p d+ + + l+lpk f++e+g++k++  ++ l  ++g +    l  r ++g + l+kGWk+FvkangL++g   ++kl++ +++++v++++
  676783408 1831 FITFTLPRDYVSISSLSLPKLFLRENGINKPG--EVYLLGKDGLKLPTSL-LRDNKGIMSLGKGWKDFVKANGLESGF--TLKLIW-EDTTPVLSLC 1921
                 67778899999999*************99766..8***************.566667799****************95..566668.6777777766 PP
11B356.35.9e-1819742069199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
         B3    1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98  
                 f++ ++++++ +++rl+l k+f++e+g++k++   +tl  ++g + + kl  +k ++ ++l++GW +F++angLk gD++++kl++ +++++v++++ 
  676783408 1974 FVTLTITPSSVRQSRLSLLKTFTKENGINKPG--VITLLGRDGMKHQTKLLLDKVKQIMYLGSGWIGFAEANGLKIGDSFTLKLIW-EDTNPVLSLCP 2068
                 677788899999999************99776..7***************99**********************************.89999999986 PP

                 S CS
         B3   99 k 99  
                 +
  676783408 2069 T 2069
                 5 PP
12B356.84.1e-1821212215199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
         B3    1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98  
                 f +v+++++ l+s+r++lpkkf++e+g++k++  ++ l  ++   W  kl ++ k+gr+ l++GW +F++an+ k g+fv+++ ++ +++++++k++r
  676783408 2121 FMTVTITPNILRSNRMRLPKKFVRENGLNKPG--MINLLGKDDTMWIAKL-VKEKDGRMNLGDGWTDFAEANDFKPGEFVTLESIW-EDETPMIKFLR 2214
                 788999***********************766..8***************.677888899***********************999.88889***999 PP

                 S CS
         B3   99 k 99  
                 k
  676783408 2215 K 2215
                 7 PP
13B342.21.4e-1322532343598
                 -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE- CS
         B3    5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfr 98  
                 ++++   + ++l+lp +f++++ ++k +  ++t+  e+  + + +l    ++g +vl++GW eF++ang+k g++++++++++ +++++ +k+++
  676783408 2253 TLTPEDVRACMLILPSQFLKANAINKLG--KITILGENKMELSAYL--LSRDGIVVLEDGWDEFCEANGVKLGESFTLEFTNEqDKTSPILKFCS 2343
                 45556666789***********999766..7999999999999999..999999*************************9988899999999886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.101.9E-839109IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.9E-1142129IPR015300DNA-binding pseudobarrel domain
CDDcd100171.12E-1046129No hitNo description
PROSITE profilePS508636.56947146IPR003340B3 DNA binding domain
SMARTSM010193.4E-1348131IPR003340B3 DNA binding domain
PfamPF023626.8E-848109IPR003340B3 DNA binding domain
SMARTSM010191.9E-5151237IPR003340B3 DNA binding domain
SuperFamilySSF1019368.44E-12163233IPR015300DNA-binding pseudobarrel domain
PfamPF023628.0E-10165234IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.104.1E-9174231IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086310.236176237IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.102.5E-15340441IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019363.34E-17344444IPR015300DNA-binding pseudobarrel domain
CDDcd100173.78E-14347440No hitNo description
SMARTSM010194.8E-17348444IPR003340B3 DNA binding domain
PROSITE profilePS5086312.464348444IPR003340B3 DNA binding domain
PfamPF023623.0E-14349438IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.8E-12477565IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.1E-13480567IPR015300DNA-binding pseudobarrel domain
SMARTSM010194.8E-9484577IPR003340B3 DNA binding domain
PROSITE profilePS5086310.01484577IPR003340B3 DNA binding domain
PfamPF023621.5E-11484565IPR003340B3 DNA binding domain
CDDcd100174.41E-9488565No hitNo description
Gene3DG3DSA:2.40.330.101.3E-20762868IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019368.83E-20766866IPR015300DNA-binding pseudobarrel domain
CDDcd100172.72E-14768863No hitNo description
SMARTSM010192.0E-27770865IPR003340B3 DNA binding domain
PROSITE profilePS5086313.987770865IPR003340B3 DNA binding domain
PfamPF023621.9E-17770864IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.109.5E-219201029IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019362.75E-229251026IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086315.8769291024IPR003340B3 DNA binding domain
CDDcd100173.03E-189291022No hitNo description
SMARTSM010192.1E-319291024IPR003340B3 DNA binding domain
PfamPF023624.6E-209291023IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.103.9E-2212371342IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019363.53E-2112411341IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086314.4812431338IPR003340B3 DNA binding domain
SMARTSM010193.1E-2512431338IPR003340B3 DNA binding domain
CDDcd100172.23E-1512471336No hitNo description
PfamPF023621.5E-1812521337IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.107.0E-1914041504IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.41E-2014051498IPR015300DNA-binding pseudobarrel domain
CDDcd100172.68E-1714061499No hitNo description
SMARTSM010195.8E-3114061501IPR003340B3 DNA binding domain
PROSITE profilePS5086314.76214061501IPR003340B3 DNA binding domain
PfamPF023623.3E-1814061499IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.0E-1715481638IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.14E-1815511637IPR015300DNA-binding pseudobarrel domain
CDDcd100179.03E-1415541638No hitNo description
PROSITE profilePS5086311.94215551652IPR003340B3 DNA binding domain
SMARTSM010191.6E-1815551643IPR003340B3 DNA binding domain
PfamPF023622.5E-1515591641IPR003340B3 DNA binding domain
CDDcd100171.75E-916291714No hitNo description
SuperFamilySSF1019366.87E-1116421718IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.103.4E-1216431718IPR015300DNA-binding pseudobarrel domain
SMARTSM010190.00416441719IPR003340B3 DNA binding domain
PROSITE profilePS508639.57316601719IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.5E-1318281920IPR015300DNA-binding pseudobarrel domain
CDDcd100177.46E-1318291922No hitNo description
SuperFamilySSF1019363.14E-1418291921IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086310.89818311924IPR003340B3 DNA binding domain
SMARTSM010192.7E-1918311924IPR003340B3 DNA binding domain
PfamPF023624.6E-1218311921IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.2E-2019662075IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086311.9719742070IPR003340B3 DNA binding domain
SMARTSM010195.2E-2619742070IPR003340B3 DNA binding domain
CDDcd100173.09E-1719742068No hitNo description
SuperFamilySSF1019361.55E-2019742074IPR015300DNA-binding pseudobarrel domain
PfamPF023623.0E-1719742068IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.107.1E-2021122220IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019364.71E-2121172217IPR015300DNA-binding pseudobarrel domain
CDDcd100171.37E-1721202214No hitNo description
SMARTSM010196.8E-2621212216IPR003340B3 DNA binding domain
PROSITE profilePS5086313.77521212216IPR003340B3 DNA binding domain
PfamPF023626.8E-1721212215IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.106.2E-1422462342IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019367.85E-1522482342IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086310.37722492345IPR003340B3 DNA binding domain
SMARTSM010191.9E-1622492345IPR003340B3 DNA binding domain
PfamPF023621.1E-1222492343IPR003340B3 DNA binding domain
CDDcd100179.95E-1022532331No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 2350 aa     Download sequence    Send to blast
MKRQHPRIDE PGDNDDNMEI RRKKKAKKNN SETEVDSSSS DDSDHPCFVA LVTASNLQKD  60
ALYFPKDFTS SNVIKRDCRK IVVRDRWERS WSLNLRFNKS SDTFYIRRGN FFVFKLVENR  120
EIPLLSFYST KSINDGTQGN KNDKESCMEH LTTPIKNHLV TLTIEHGSFK EGHLFITLSG  180
KNGTKLVANL RESRGSMRLG KGWKDFAIAN GLKAGDSFTL EVIWKDKTPM LSLFGTKSTS  240
VRMQQGEHCS KASDKESVST KPNTGNKKRK AKNYREERSS NELKDTTPML SLCRTDSSSD  300
RRQQGKNYSK SSEKESVSTE PSSGNMTENA KNNKEERRDS SSTIHDCFVT LTHRHETLKF  360
GKQYLPLWFT RKNGLDKPRK ITLLGKDSRK WVAELRQENK SGGFRLGKGW IEFAKANGLK  420
IGNSFTLDSI WENETPMLTL QGECSEDRVK ENFSTQPSSG NKIREATNNI EERRDSSSAI  480
QNQFVSLTLT PEDVKDCELI LPSQFMKDND INKLGKITLL GKKGTKWFGY LLTKDGIVTM  540
GCGLKGFCEA NGVETGESFI LEFIGYIWMN TNLQSRTEES FTSNEENGGG GDHDNTALIF  600
NQPTSHFCRS TVVWRRRRRR CVAHDRRFGG EALRFSNMMF QVSDLGPSYC NIRDVAASSS  660
NNGQDKIGNI SMTKHQNTRQ EAGFSSNHCV DQDNIELPRN KKVKKNTPET KADSSSAHSC  720
FVADVSASSL HKDALFLAQD LTSSDGLKRK SHKYSPKRII SSNSSRDKRF LTFILAPVDV  780
RHCRLRLPMQ FSRENGINKP GKIYLLGNDG SKWLANLLLE SRGRMTVGDG WKSFVKANGL  840
KIGGSYTLEL NWEDTTPVLC LCPAEFSIDS SRVEGECSEA SQKESLPIRP SSKNEIDKYE  900
NRKEETSSWE REKNNLRWRD LSSASQNRFL TLTITPDSLR HGRLRLPLEF MTENSMNKPG  960
DITLLGKDGA KWLASLLLER RGRMCLGKGW KDFAKANGLK TGDSITLESI WEDSTPVLSL  1020
LRTESNSDIR QQSECSKARE KQSVFTEPSS VIKTRTAEST REESRMYPLQ RLDSSLATQN  1080
RFATSTLSPE IVRLVAHDYR IGEIVVFKDE GDMMLQVSEL RPSFCEIRDV LAPNSNNGQE  1140
NISSMVIKMH PHMRNEAGFP SYDGGQYNIE LPRKKKVKNN PEKEPDTSSH HSCLVHVTAS  1200
NLHSDALHLP KDFTSLDGIK IKRRKKYTPT QIVSSYSSSE KQLATFILAP IDVRNCRLRL  1260
PMQFTRDNGI NKPGKVYLLG KDGSKWLANL LLESRGRMTL GDGWKSFVKA NGLKTGDSFG  1320
LKVNWEDTTP VLSLCPAECS RESREGGGCL EASEKEPLPV EPSSVKEISK DVNNEDENSE  1380
EESRSWVREK NHLIWKHSTS PGHSRFLTLT ITPDSLRHGR LRLPLQFMMD NSMNKPGDIT  1440
LLGKDDVKWL VSLLLERRGR MSLGKGWKDF AKANRLKTGD SITLESIWED EIPVLSLVRV  1500
ESSNDGDQSE SSKQSLSTGP ISGNKTRKAV NNIEGSSRSW ELERRDSSSA IQNRIVILTL  1560
TPEDVRNCNL HLPSQFMRAN GIIKPGKITM LGRSGMKWFA YVLSEDGTVA LGNGWKGFCE  1620
ANGVMVGESF VLELIPNEDT NHMIPSDFFS KYIEGGSVEK KAVLKSDSSD ITWKVKMNGP  1680
ILSDGWREFA MANNLQIGGV VLVRYEGDMV FHVSYSCENS PDIQPTSNND DGKCLLRKHS  1740
HPRTDVGDLP KNKRVKTNSN ETERETPLQS FCPTESVSSR RQQDCSEEED IERESSEDEP  1800
LTEIEKKKSN PKRKAVSYSS YSSYSSCHKR FITFTLPRDY VSISSLSLPK LFLRENGINK  1860
PGEVYLLGKD GLKLPTSLLR DNKGIMSLGK GWKDFVKANG LESGFTLKLI WEDTTPVLSL  1920
CCPESTCDKE EEEYFEAIKK QCNFIDLSNR VKSSNEDNNK EESRPSERVN LKQFVTLTIT  1980
PSSVRQSRLS LLKTFTKENG INKPGVITLL GRDGMKHQTK LLLDKVKQIM YLGSGWIGFA  2040
EANGLKIGDS FTLKLIWEDT NPVLSLCPTE CSIDRETGGE SSEENQKNSI PIDESNKDET  2100
RIEEGKQRNN IDSSPRSQNR FMTVTITPNI LRSNRMRLPK KFVRENGLNK PGMINLLGKD  2160
DTMWIAKLVK EKDGRMNLGD GWTDFAEAND FKPGEFVTLE SIWEDETPMI KFLRKGSNSS  2220
KANKKESIST EDTEPRTKEL ASAIQDSRFA TLTLTPEDVR ACMLILPSQF LKANAINKLG  2280
KITILGENKM ELSAYLLSRD GIVVLEDGWD EFCEANGVKL GESFTLEFTN EQDKTSPILK  2340
FCSWSKYKSD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1614619RRRRRR
2747751KRKSH
Cis-element ? help Back to Top
SourceLink
PlantRegMap676783408
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013628510.10.0PREDICTED: B3 domain-containing protein REM-like 1
TrEMBLA0A078G7V60.0A0A078G7V6_BRANA; BnaC03g27030D protein
STRINGBo3g042160.10.0(Brassica oleracea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM150791619
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24690.10.0B3 family protein