PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 676783394
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
Family B3
Protein Properties Length: 1542aa    MW: 174951 Da    PI: 8.4744
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
676783394genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.74.2e-1320981394
               TT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
         B3 13 sgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94
               +  l++p +f++++     ++kk+++ +l+  ++s  +W+v++  ++++    l++GW+eF+ an+L++g++v+ +++g+++f  +v
  676783394 20 HTDLMIPSDFFTKYiegrsMEKKNTTAELKSDSSSDITWKVQM--TGRR----LSEGWREFAVANNLQVGEVVLVRYEGEMRF--HV 98
               4459************98766666666777777888*******..8888....9***********************998887..44 PP

2B359.94.4e-19179267494
                E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
         B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                +l ++++l+++ l++p + ++++g++  + +++ l +   rsW++ l+++k+s+++++++GW++F+++ng ++g f++Fkl+ +   ++v+
  676783394 179 ALFTASSLRKDKLYIPQHVTSSNGLNR-QCRKIDLINGGERSWTLDLSFNKSSDTFYISRGWRNFCDENGQEAGSFIMFKLVANG-DTPVL 267
                577889999999************996.567*************************************************99854.44555 PP

3B344.62.6e-14377467197
                EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
         B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                f++ ++p+d+ +++ l lp  f++e+g++k++  ++ +  ++g++W   l   +++g + l+kG keFvkangL++g   ++kl++ +++++v++++
  676783394 377 FVTFTLPPDYVTLSKLNLPQLFVRENGINKPG--EIYILGKDGKKWPTSL-LLNNRGFMSLGKGFKEFVKANGLESGF--TLKLIW-EDTTPVFSLC 467
                6778899********************99766..8***************.67788899*****************95..566668.7777888877 PP

4B364.61.5e-20529623198
                EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
         B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                f++ ++++d+++++rl+lp+kfa+e++++k   ++++l  ++g + +  l+++k+++ + l++GWk F ++n+L+ gD++++kl++ +++++v++++ 
  676783394 529 FVTLTITPDSFRNCRLRLPRKFARENDINKL--RMISLLGRDGTKHQTMLKINKQGSDIALGSGWKVFTEENDLRIGDSFTLKLIW-EDRTPVLSLCP 623
                788899********************99964..59***************99**********************************.88889999986 PP

5B352.21.1e-16684777197
                EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
         B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                f++ ++++ +++++ l+lp +fa+e++++k ++++  l  ++gr+W  k++ ++k+ ++ l+kGW +F+kan+ k+gD++  +l+++ +++ ++++f
  676783394 684 FVTLTIKPLSFEKCFLTLPAQFARENSMNK-SGMMTYLVGKDGRKWLTKIKQWNKG-TVGLAKGWIDFAKANNFKSGDSFRMELIWE-DGTRMLRLF 777
                66777888899***************8886.7799***************888885.789*************************95.444455555 PP

6B341.32.7e-13811899394
                EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
         B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 
                + ++++   + ++l+lp +f++++g++k +  ++t+  e+  + + +l    ++g +vl++GW eF++ang+k g+++ ++++++ ++++++v
  676783394 811 TLTLTPEDVRACMLILPSQFLKANGINKLG--KITILGENKMELSAYL--LSRDGIVVLEDGWDEFCEANGVKLGESFSLEFTNEqDKTSPMV 899
                5556666677789************99766..7999999999999999..999999*************************998767777776 PP

7B342.79.8e-1496210381597
                 -EE--HHH.HTT.---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
         B3   15 rlvlpkkfaeeh.ggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97  
                   ++p  f+++h +g  +e++t +l++  s  +Wevk+  + + +   lt+GWkeF  a++L+ gD+++F+ +++++f  +v+++
  676783394  962 KQTIPVAFFSKHlEGR-NEQTTAKLRSdASKITWEVKI--EDG-Q--KLTDGWKEFTLAHDLRIGDILIFRQEKDMTF--HVTLL 1038
                 459*********8444.456799999868889******..333.2..4***********************6555666..88765 PP

8B369.64.2e-2210871173695
                 ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
         B3    6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95  
                 + +++l+ + l lp++f++++g++++ + +++l++e+g+sW++ l  +kksg++++++GW++F++angLk+gD +++kl++  +++lv++
  676783394 1087 VAPSTLRYDTLNLPRSFVKANGLETRLG-EIVLMNEKGKSWTLAL-KQKKSGTTYIRQGWRSFCRANGLKAGDLFILKLIQ-GGRTLVLR 1173
                 678899999*************998776.****************.58888899*************************98.55555655 PP

9B356.35.7e-1812271316697
                 ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
         B3    6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97  
                 +++ +l+ + l lp++f++ +g+k++++ ++ l++e+g+ W+  l+ + ++g++++++GW++F+ angLk+    +Fkl++r ++++v+++ 
  676783394 1227 VSPATLRYDKLNLPRSFVRVNGLKTRRG-EILLMNEKGKAWTSVLKQELCGGSTYIRGGWRSFCTANGLKTEGLYTFKLIQR-GKTPVLRLS 1316
                 5677788999***********9998776.****************99999999***************************95.555777765 PP

10B366.53.9e-2113741456689
                 ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
         B3    6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89  
                 +++++l+ + l lpk+f++e+++ + ++ ++ l++e+g sW+++l+ +++ g++++t+GW +F+ an+L++g f++Fkl++r +
  676783394 1374 VTPSSLRDDKLNLPKSFVRENDIHEGCG-KILLMNEKGTSWTLNLKRKRSCGTVYITGGWTSFCWANELRAGSFFTFKLIKRGG 1456
                 678999999************9998777.****************98999999**************************98643 PP

11B3536e-17145615391499
                 T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
         B3   14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99  
                 g l lp +f+++hg++  e++++t+ d++g +W+  l+ +k ++r+ l +GW+eF +an +k+g++++ kl+++ ++ +v+k+++k
  676783394 1456 GTLFLPVRFTKSHGIN--EGTKMTMLDKNGVKWSTDLRSEKIGDRVRLVGGWREFFEANSVKTGESIIVKLIWEGDKCCVLKFCSK 1539
                 6799**********99..6679***************************************************9888889998876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086311.4348104IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.105.4E-148106IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.49E-138107IPR015300DNA-binding pseudobarrel domain
SMARTSM010198.8E-1411104IPR003340B3 DNA binding domain
PfamPF023627.7E-92096IPR003340B3 DNA binding domain
CDDcd100171.43E-92399No hitNo description
Gene3DG3DSA:2.40.330.101.1E-18168272IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019363.14E-18172274IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086314.325176272IPR003340B3 DNA binding domain
CDDcd100171.62E-15176269No hitNo description
SMARTSM010194.6E-27177273IPR003340B3 DNA binding domain
PfamPF023626.7E-17178267IPR003340B3 DNA binding domain
CDDcd100171.95E-12375468No hitNo description
SuperFamilySSF1019361.92E-14375467IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.4E-14375477IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086311.434377470IPR003340B3 DNA binding domain
PfamPF023622.0E-13377467IPR003340B3 DNA binding domain
SMARTSM010191.1E-23377470IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.107.8E-22522629IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019364.51E-21528629IPR015300DNA-binding pseudobarrel domain
PfamPF023621.2E-19529623IPR003340B3 DNA binding domain
CDDcd100171.11E-16529623No hitNo description
PROSITE profilePS5086312.816529625IPR003340B3 DNA binding domain
SMARTSM010191.8E-24529625IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.104.5E-18674781IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019364.32E-17680778IPR015300DNA-binding pseudobarrel domain
PfamPF023621.3E-14684777IPR003340B3 DNA binding domain
PROSITE profilePS5086314.367684780IPR003340B3 DNA binding domain
SMARTSM010192.4E-22684780IPR003340B3 DNA binding domain
CDDcd100175.89E-16696777No hitNo description
Gene3DG3DSA:2.40.330.104.4E-15802892IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019369.42E-16805891IPR015300DNA-binding pseudobarrel domain
CDDcd100174.28E-10808891No hitNo description
PfamPF023623.5E-12809899IPR003340B3 DNA binding domain
PROSITE profilePS5086310.63809903IPR003340B3 DNA binding domain
SMARTSM010193.5E-16809905IPR003340B3 DNA binding domain
SMARTSM010199.3E-139541041IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.102.7E-219611054IPR015300DNA-binding pseudobarrel domain
PfamPF023622.6E-99631035IPR003340B3 DNA binding domain
SuperFamilySSF1019365.1E-159631048IPR015300DNA-binding pseudobarrel domain
CDDcd100176.81E-109641038No hitNo description
PROSITE profilePS5086311.5199651041IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.7E-2110781174IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019368.63E-1910791174IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086316.38410821178IPR003340B3 DNA binding domain
SMARTSM010196.5E-2810821178IPR003340B3 DNA binding domain
PfamPF023625.4E-2110861174IPR003340B3 DNA binding domain
CDDcd100171.71E-1810901174No hitNo description
Gene3DG3DSA:2.40.330.103.2E-1712161316IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.55E-1612181316IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086313.71912221318IPR003340B3 DNA binding domain
SMARTSM010191.5E-2112231319IPR003340B3 DNA binding domain
PfamPF023624.5E-1712261316IPR003340B3 DNA binding domain
CDDcd100178.79E-1412311315No hitNo description
Gene3DG3DSA:2.40.330.103.2E-1913671455IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086315.07213691466IPR003340B3 DNA binding domain
SMARTSM010191.9E-1813691457IPR003340B3 DNA binding domain
SuperFamilySSF1019361.45E-1713711458IPR015300DNA-binding pseudobarrel domain
PfamPF023626.5E-1913741457IPR003340B3 DNA binding domain
CDDcd100171.44E-1813741458No hitNo description
CDDcd100176.86E-1614541537No hitNo description
SuperFamilySSF1019363.92E-1714541538IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.8E-1514571539IPR015300DNA-binding pseudobarrel domain
SMARTSM010191.4E-1214581540IPR003340B3 DNA binding domain
PROSITE profilePS5086310.16514751539IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1542 aa     Download sequence    Send to blast
MAESTLLHPQ FYHTLVSGFH TDLMIPSDFF TKYIEGRSME KKNTTAELKS DSSSDITWKV  60
QMTGRRLSEG WREFAVANNL QVGEVVLVRY EGEMRFHVSD LGSSCCTTLL KKRLYQRTQV  120
DFSSNDDDDD GDDDDDEGFN MWDAYGTEFQ RTKKVWKNNP EAEAEGVSSS PSDKSRFVAL  180
FTASSLRKDK LYIPQHVTSS NGLNRQCRKI DLINGGERSW TLDLSFNKSS DTFYISRGWR  240
NFCDENGQEA GSFIMFKLVA NGDTPVLSFS PTESRDDRNQ RDCSEASERE SLSTESPVLS  300
FCSTESIGIR RHRDCSETSE SEFLSTELSS EEENTEGDGS GNDCSSVESL VEIGKKKCSR  360
KRRVVSFSSY SPCHKRFVTF TLPPDYVTLS KLNLPQLFVR ENGINKPGEI YILGKDGKKW  420
PTSLLLNNRG FMSLGKGFKE FVKANGLESG FTLKLIWEDT TPVFSLCCPE STSDRVQEEY  480
FKAIDKRSLF IDPSKRDRIS KDENKKEESR SWERKTKGRY STPLSRKQFV TLTITPDSFR  540
NCRLRLPRKF ARENDINKLR MISLLGRDGT KHQTMLKINK QGSDIALGSG WKVFTEENDL  600
RIGDSFTLKL IWEDRTPVLS LCPSECSIER GGGGGACSKR NQEKSLPIEP NSCKDKNIND  660
DNSKEKNSRE ENSKDSTPSS QKQFVTLTIK PLSFEKCFLT LPAQFARENS MNKSGMMTYL  720
VGKDGRKWLT KIKQWNKGTV GLAKGWIDFA KANNFKSGDS FRMELIWEDG TRMLRLFHTE  780
SSSSKTHEKE SVSIEPASRD SSSAVQNRFV TLTLTPEDVR ACMLILPSQF LKANGINKLG  840
KITILGENKM ELSAYLLSRD GIVVLEDGWD EFCEANGVKL GESFSLEFTN EQDKTSPMVS  900
SQSLVRLFSM EVHEEDLYDG ALKRLDLQRK KKRLKNAREE YDVIIERAYD DEHQEKQRCR  960
SKQTIPVAFF SKHLEGRNEQ TTAKLRSDAS KITWEVKIED GQKLTDGWKE FTLAHDLRIG  1020
DILIFRQEKD MTFHVTLLGP SCCEIQYESC LEEEDNLGNI PKKKRVKSPR KETGSASLDP  1080
SCLVSNVAPS TLRYDTLNLP RSFVKANGLE TRLGEIVLMN EKGKSWTLAL KQKKSGTTYI  1140
RQGWRSFCRA NGLKAGDLFI LKLIQGGRTL VLRLSTTESE EEDGSEGDEV EESNLERMPK  1200
KKKVKKNPRK ETKFSSREDL SCFLAYVSPA TLRYDKLNLP RSFVRVNGLK TRRGEILLMN  1260
EKGKAWTSVL KQELCGGSTY IRGGWRSFCT ANGLKTEGLY TFKLIQRGKT PVLRLSSTES  1320
ESEEDSSDSD EEESLPVEPG SDDETNFEKI QRKKSPKGEA ESSSLYQSCY GANVTPSSLR  1380
DDKLNLPKSF VRENDIHEGC GKILLMNEKG TSWTLNLKRK RSCGTVYITG GWTSFCWANE  1440
LRAGSFFTFK LIKRGGTLFL PVRFTKSHGI NEGTKMTMLD KNGVKWSTDL RSEKIGDRVR  1500
LVGGWREFFE ANSVKTGESI IVKLIWEGDK CCVLKFCSKV KQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1928935RKKKRLKN
Cis-element ? help Back to Top
SourceLink
PlantRegMap676783394
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A087GRX60.0A0A087GRX6_ARAAL; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM137801326
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24650.10.0DNA binding;DNA binding;sequence-specific DNA binding transcription factors