PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 676774144 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
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Family | NAC | ||||||||
Protein Properties | Length: 206aa MW: 23143.8 Da PI: 9.1948 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 35.6 | 2.8e-11 | 103 | 151 | 1 | 49 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49 lp+G+rF Pt+ el+++yL+ +++g ++++++ i+ +d+++veP +Lp+ 676774144 103 LPVGYRFYPTEVELISFYLRIQLDGGNTTINSLIPILDVFNVEPTQLPM 151 799***************************999**************93 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.66E-11 | 98 | 153 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 11.692 | 103 | 206 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence Send to blast |
MYEELTSVSG YLCNRLLSTG KDGFGTGGMA SFCNLPRRPK YPEGTLLQLR HVPRTQNIKA 60 DKLAHSARSQ SLHVVHIDTE LPVWLTKSKQ IFCKRKQTIE DELPVGYRFY PTEVELISFY 120 LRIQLDGGNT TINSLIPILD VFNVEPTQLP MNQLWDANPR SPLLLRPHIL SLGPLGLSLC 180 PHVLSLGHLG SPLSDGRFVS REVRKS |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 676774144 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G44350.1 | 5e-23 | NAC domain containing protein 61 |