PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 676759080
Organism
Sisymbrium irio
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
Family BES1
Protein Properties Length: 287aa    MW: 31214 Da    PI: 9.7764
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
676759080genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822212.69.9e-66141581143
     DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslks 100
                g++gr+ptwkErEnnk+RERrRRaiaaki++GLR+qGnyklpk++DnneVlkALc eAGw+v++DGttyrkgs+p+     a   + +s +ss+q+s++s
  676759080  14 GATGRMPTWKERENNKKRERRRRAIAAKIFTGLRSQGNYKLPKHCDNNEVLKALCVEAGWIVHEDGTTYRKGSRPT---TEATLPRVMSACSSIQLSPQS 110
                589*************************************************************************...66778899************* PP

     DUF822 101 salaspvesysaspksssfpspssldsislasa.....asllpvlsvl 143
                sa++sp++sy+asp+sss+psp++ld+++++ +     + l+p+l++l
  676759080 111 SAFQSPIPSYQASPASSSYPSPTRLDHNPIRFDsnqpsTYLIPYLQNL 158
                ***************************999754456767777777766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.3E-6216158IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005773Cellular Componentvacuole
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    Send to blast
MTASGGGSTA GGAGATGRMP TWKERENNKK RERRRRAIAA KIFTGLRSQG NYKLPKHCDN  60
NEVLKALCVE AGWIVHEDGT TYRKGSRPTT EATLPRVMSA CSSIQLSPQS SAFQSPIPSY  120
QASPASSSYP SPTRLDHNPI RFDSNQPSTY LIPYLQNLAP LRFTNSAPVT PPTSSPRGSN  180
PRLPKWQSSN FPVSAPSSPT RRLHHHYTSI PECDESDVST VDSCRWTRLQ PVIVSQTCPP  240
SPTFNLVKSS VCVGGGDVSV KPWEGEKIHD VGIDDLELTL GNTKGRG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A3e-2518103372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B3e-2518103372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C3e-2518103372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D3e-2518103372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap676759080
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1891891e-119AC189189.1 Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB002E24, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022567550.11e-149BES1/BZR1 homolog protein 1-like
SwissprotQ9S7F31e-134BEH1_ARATH; BES1/BZR1 homolog protein 1
TrEMBLA0A3P5ZY651e-147A0A3P5ZY65_BRACM; Uncharacterized protein
STRINGBra012891.1-P1e-146(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM144671721
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50750.11e-124BES1/BZR1 homolog 1