PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 676743516
Organism
Sisymbrium irio
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
Family NAC
Protein Properties Length: 355aa    MW: 39901.9 Da    PI: 8.4119
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
676743516genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM60.26.9e-1926666128
        NAM  66 kkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                kk+ ++  ++r+t  gyWk tg d+++++k  +g ++g+kktLv ykg++ +g++t+Wvmhey++
  676743516   2 KKNGKKMVTKRTTPFGYWKPTGVDRKIKDKrgNGVEIGIKKTLVHYKGKSAEGVRTSWVMHEYHI 66 
                566778889********************9777788***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100526.114185IPR003441NAC domain
SuperFamilySSF1019418.11E-22385IPR003441NAC domain
PfamPF023654.1E-81066IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    Send to blast
MKKNGKKMVT KRTTPFGYWK PTGVDRKIKD KRGNGVEIGI KKTLVHYKGK SAEGVRTSWV  60
MHEYHITSLP LVVQRPYVIC KVMYNGDDGD SSYGNKSNEL SHSMVIDSMT TAASEFEQLD  120
QEDNNLFYED DLLRNEEEDL SLFNTDTFFN DNNSSYLHPQ IPWDEEFIRG MLNFNGGNFD  180
NVCPNTEIRT QENRSNHRPK KPLTGIIANS SSDSEAESIS ATSYGGTTSP GGSSGSSSGH  240
FNTSVDKILL LKKDSCKHIR SPAETFINRK TGESTIPSKE EVKEGKSKAF DASMEKNSSS  300
SMVKTEKKGW FITEEAMQRN RKNPPYIYLM NMIIGFIILV AFIGNIKSVL LSFKT
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP). Involved in salt stress response during seed germination and seedling growth. Binds the auxin-responsive IAA30 gene promoter and may serve as a molecular link that interconnects a developmental feedback loop of auxin signaling with a salt signal transduction pathway during seed germination (PubMed:21450938). {ECO:0000269|PubMed:21450938}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap676743516
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salt stress and abscisic acid (ABA) in roots. {ECO:0000269|PubMed:21450938}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018457689.11e-138PREDICTED: NAC domain-containing protein 69-like
SwissprotQ9M1261e-105NAC69_ARATH; NAC domain-containing protein 69
TrEMBLA0A0D3DZV31e-131A0A0D3DZV3_BRAOL; Uncharacterized protein
STRINGBo9g004100.11e-131(Brassica oleracea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19821971
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01550.11e-76NAC domain containing protein 69
Publications ? help Back to Top
  1. Liang M, et al.
    Subcellular Distribution of NTL Transcription Factors in Arabidopsis thaliana.
    Traffic, 2015. 16(10): p. 1062-74
    [PMID:26201836]
  2. He L, et al.
    Arabidopsis ANAC069 binds to C[A/G]CG[T/G] sequences to negatively regulate salt and osmotic stress tolerance.
    Plant Mol. Biol., 2017. 93(4-5): p. 369-387
    [PMID:27975189]