PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 676743190 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
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Family | NZZ/SPL | ||||||||
Protein Properties | Length: 317aa MW: 34103.3 Da PI: 9.4467 | ||||||||
Description | NZZ/SPL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NOZZLE | 538.6 | 1.5e-164 | 1 | 317 | 1 | 314 |
NOZZLE 1 matslffmstdqnsvrnpnellrntrlvvnssgeirte.tkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkklvvatvgdtssvaaisnta 99 matslffm tdq svrnpnellrnt+lv n sgeirte +kksrgrkpgskt+q +qkk +lrgmgvakler i+eeekkk+vva+ g +s +a 676743190 1 MATSLFFMPTDQTSVRNPNELLRNTYLV-NGSGEIRTEpPKKSRGRKPGSKTGQPNQKKQALRGMGVAKLERAIAEEEKKKMVVAGGGGGGDTPVASPNA 99 9**************************9.*********99*********************************************99888877788889* PP NOZZLE 100 trlpvpvdrgvvlqgfps.......slgs...srilcggvgsgqvmidpvispwgfvetsatthelssisnpqmynassnnrcdtcfkkkrldgdqnnvv 189 t pv d+gvvlqgfps s+g+ sr+lcggvgsgq+midpv+spwgfvetsa helssi+npqmynas n+rcdtcfkkkrldgdq nvv 676743190 100 THSPVLPDPGVVLQGFPSyggglnmSVGGysrSRFLCGGVGSGQIMIDPVCSPWGFVETSA--HELSSIPNPQMYNAS-NHRCDTCFKKKRLDGDQ-NVV 195 ******************999999999989999****************************..*************95.999**************.*** PP NOZZLE 190 rsng.ggfskytmi.pppmngydeyllqsdhhqrsqgflydqriaraasvsaasasinpyfneatnltgsreefgsvlegnprngsrgvkeyeffpgkyd 287 rsng ggfs ytm+ ppmngyd+ +l++d q+ qgf+yd+riar+a + asasinpyfneatn+tgs+eefg gnp+ng+rgvkeyeffpgkyd 676743190 196 RSNGsGGFSSYTMMiSPPMNGYDH-FLPPD--QKNQGFFYDHRIARSA--APASASINPYFNEATNHTGSMEEFGR---GNPKNGTRGVKEYEFFPGKYD 287 ***9789*****9989*******9.89***..****************..7899*********************7...5******************** PP NOZZLE 288 ervskvakvas.lvgdcspn..tidlslkl 314 ++++k+++va+ +vgdcspn tidlslkl 676743190 288 NFQGKSFPVATsSVGDCSPNtpTIDLSLKL 317 ********98637*******999******8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF08744 | 4.8E-165 | 3 | 317 | IPR014855 | Plant transcription factor NOZZLE |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0048653 | Biological Process | anther development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 317 aa Download sequence Send to blast |
MATSLFFMPT DQTSVRNPNE LLRNTYLVNG SGEIRTEPPK KSRGRKPGSK TGQPNQKKQA 60 LRGMGVAKLE RAIAEEEKKK MVVAGGGGGG DTPVASPNAT HSPVLPDPGV VLQGFPSYGG 120 GLNMSVGGYS RSRFLCGGVG SGQIMIDPVC SPWGFVETSA HELSSIPNPQ MYNASNHRCD 180 TCFKKKRLDG DQNVVRSNGS GGFSSYTMMI SPPMNGYDHF LPPDQKNQGF FYDHRIARSA 240 APASASINPY FNEATNHTGS MEEFGRGNPK NGTRGVKEYE FFPGKYDNFQ GKSFPVATSS 300 VGDCSPNTPT IDLSLKL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator of sporocyte development (PubMed:10465788). Acts as an adapter-like transcriptional repressor recruiting TPL/TPR corepressors to inhibit TCP transcription factors (PubMed:25378179). Required for nucellus and embryo sac development (PubMed:10500234). Plays a central role in patterning both the proximal-distal and the adaxial-abaxial axes during ovule development (PubMed:12183381). Involved in establishing the prospective chalaza of the ovule and in controlling the cell number and the length of the funiculus, and is required for the development of the integuments (PubMed:10976054). Required, with BEL1, for cytokinin-induced PIN1 expression in ovules (PubMed:22786869). Involved in controlling stamen identity (PubMed:19726570). May also regulate the morphology of lateral organs by repressing auxin production (PubMed:18557819). {ECO:0000269|PubMed:10465788, ECO:0000269|PubMed:10500234, ECO:0000269|PubMed:10976054, ECO:0000269|PubMed:12183381, ECO:0000269|PubMed:18557819, ECO:0000269|PubMed:19726570, ECO:0000269|PubMed:22786869, ECO:0000269|PubMed:25378179}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 676743190 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by the transcription factor AGAMOUS (PubMed:15254538). Regulated by ATXR3/SDG2 via chromatin methylation (PubMed:21037105). Triggered by TGA9 AND TGA10 in anthers (PubMed:20805327). {ECO:0000269|PubMed:15254538, ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:21037105}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_013671376.1 | 1e-171 | protein SPOROCYTELESS-like | ||||
Swissprot | O81836 | 1e-130 | SPL_ARATH; Protein SPOROCYTELESS | ||||
TrEMBL | Q2HZF8 | 1e-170 | Q2HZF8_BRAJU; Sporocyteless | ||||
STRING | Bra026359.1-P | 1e-170 | (Brassica rapa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM13435 | 18 | 28 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27330.1 | 1e-128 | sporocyteless (SPL) |