PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 676735596
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
Family G2-like
Protein Properties Length: 411aa    MW: 46154.6 Da    PI: 7.1398
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
676735596genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.79.3e-3284137255
    G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                prlrWtpeLH +F++ave+LGG+++AtPk +l+lm+vkgL+++hvkSHLQ+YR+
  676735596  84 PRLRWTPELHLCFLQAVERLGGPDRATPKLVLQLMNVKGLSIAHVKSHLQMYRS 137
                8****************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.1E-3080138IPR009057Homeodomain-like
PROSITE profilePS5129413.32180140IPR017930Myb domain
SuperFamilySSF466893.94E-1681139IPR009057Homeodomain-like
TIGRFAMsTIGR015573.7E-2484139IPR006447Myb domain, plants
PfamPF002499.9E-1085136IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    Send to blast
MRSSSQSSEN SKTCPSNEFK ATTKKEDNKD EEDDEEEENE EERSADQSPS NNSYVEESGS  60
HHHNNDPIKK NGGSVRPYNR SKTPRLRWTP ELHLCFLQAV ERLGGPDRAT PKLVLQLMNV  120
KGLSIAHVKS HLQMYRSKKT DDPNQGDQGF SFEHGAGYTY NLSQLPMLQS FDQRPSTSLG  180
YGSGSWTDHR RQVYRSPWRG LTARDNTRTR QTLFSSQSGE RFHGVSNSTL DDKNKTISFR  240
ISSHEAAHAN NGVGEAVPRI HRSFLEGMKT FNKSWGQGLS SNPNSSTASR PQDHIATTLS  300
SNQRDNPKVA EETENVLKRK RLILSDDCDK SDQDLDLSLS LKVPRTHNNL GDCVLEDEEK  360
EHNDHEDSKG LSLSLSSPSL SKLGRAITKE DQNDHKKRKI SVLASPLDLT L
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-1785139458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-1785139458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A2e-1785139357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-1785139357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-1785139357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-1785139357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-1785139458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-1785139458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-1785139458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-1785139458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-1785139458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-1785139458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00301DAPTransfer from AT2G40260Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap676735596
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013634613.10.0PREDICTED: uncharacterized protein LOC106340283 isoform X2
TrEMBLA0A0D3BQA80.0A0A0D3BQA8_BRAOL; Uncharacterized protein
TrEMBLA0A3P6BI710.0A0A3P6BI71_BRAOL; Uncharacterized protein
STRINGBo4g025360.10.0(Brassica oleracea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM93592136
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40260.10.0G2-like family protein