PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 676721130
Organism
Sisymbrium irio
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
Family BES1
Protein Properties Length: 315aa    MW: 34321.2 Da    PI: 8.8884
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
676721130genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822211.71.9e-6581502145
     DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslkss 101
                +sgr+ptwkErEnnk+RERrRRai+akiy+GLRaqGnyklpk++DnneVlkALc eAGw+vedDGttyrkg+kp+  +e   s a+ s++sslq s++ss
  676721130   8 SSGRTPTWKERENNKKRERRRRAITAKIYSGLRAQGNYKLPKHCDNNEVLKALCLEAGWIVEDDGTTYRKGFKPP-VSEL--SGAHFSTNSSLQPSPQSS 104
                89*************************************************************************.4444..446678889999999*** PP

     DUF822 102 alaspvesysaspksssfpspssldsislasa..asllpvlsvlsl 145
                a++sp++sy+ sp sss+psps++d ++++++    llp+l++ ++
  676721130 105 AFPSPAPSYHGSPVSSSIPSPSRYDGNNNNNPssYLLLPFLHNIAS 150
                **************************99988755667788877654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056874.4E-618148IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009741Biological Processresponse to brassinosteroid
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MAAGGGSSSG RTPTWKEREN NKKRERRRRA ITAKIYSGLR AQGNYKLPKH CDNNEVLKAL  60
CLEAGWIVED DGTTYRKGFK PPVSELSGAH FSTNSSLQPS PQSSAFPSPA PSYHGSPVSS  120
SIPSPSRYDG NNNNNPSSYL LLPFLHNIAS SIPTNLPPLR ISNSAPVTPP LSSPTSRGSK  180
RKLISEQLPN GGSFHALRHP LFAISAPSSP TRRAGHQTPP TIPECDESEE DSIEDSGRWI  240
NFQSTAPTSP TFNLVKQTSM SIDMKRSDWG MSGMNVRGSE FEFENGTVKP WEGEMIHEVG  300
VEDLELTLGG TKTRC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A5e-261188372449Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B5e-261188372449Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C5e-261188372449Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D5e-261188372449Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00474DAPTransfer from AT4G36780Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap676721130
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006411962.10.0BES1/BZR1 homolog protein 2
SwissprotQ94A430.0BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBLV4LS330.0V4LS33_EUTSA; Uncharacterized protein
STRINGXP_006411962.10.0(Eutrema salsugineum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM115122333
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36780.13e-86BES1/BZR1 homolog 2