PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011102187.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family G2-like
Protein Properties Length: 474aa    MW: 52547.5 Da    PI: 5.1034
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011102187.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like107.76.3e-34256310155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     k+r+rWtpeLHe+Fv+av++LGGse+AtPk +l+lm+v+gLt++hvkSHLQkYR+
  XP_011102187.1 256 KTRMRWTPELHEAFVDAVNKLGGSERATPKGVLKLMNVEGLTIYHVKSHLQKYRT 310
                     68****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.573252313IPR017930Myb domain
Gene3DG3DSA:1.10.10.606.1E-31256312IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-24256310IPR006447Myb domain, plants
SuperFamilySSF466891.24E-17256310IPR009057Homeodomain-like
PfamPF002492.3E-10258309IPR001005SANT/Myb domain
PfamPF143792.3E-21338385IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 474 aa     Download sequence    Send to blast
MAPALFKKKS SEARPNDMET SGALPRSLRT LPSPSEEKFP KLPDSPQVTL AQELTTNVIS  60
SCPSTLSSNN KTIGHLFSSA SDHPGNLRGS LMSPDINRPR KLPFIPKPLN DGVSFSSSQL  120
SPSVTPARKL DGYAAEDNDV SWNTDGTENF PDIPLNIHSQ NSEDTCTGLT ASEDHFKRTD  180
WQDWADQLIT VDDALDSNLS DLLVDVNVPE LDAKLLELPP EVSSSQPQIH QHQHTPVSSA  240
QSCPLVSSPC ASPTIKTRMR WTPELHEAFV DAVNKLGGSE RATPKGVLKL MNVEGLTIYH  300
VKSHLQKYRT ARYKPESSEE KKSKTVSEIT SLDLKTKMDI TEALRLQMEV QKQLHEQLEI  360
QRNLQLRIEE QGKHLQIMFE QQRKMEEEKL KASSANVDEP SQPPTIEKQP SVSNVKAESS  420
EHDHASTHEI PNKEEMSCET TALEEHELDD SESSPPSKRA RADETGSSST TLVT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A5e-31256314260Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B5e-31256314260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A5e-31256314260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C5e-31256314260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D5e-31256314260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F5e-31256314260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H5e-31256314260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J5e-31256314260Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011102187.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011102186.10.0protein PHOSPHATE STARVATION RESPONSE 1 isoform X2
TrEMBLA0A2G9H1I10.0A0A2G9H1I1_9LAMI; Uncharacterized protein
STRINGXP_010262509.11e-129(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.13e-71phosphate starvation response 1