PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011102128.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family G2-like
Protein Properties Length: 460aa    MW: 50994.8 Da    PI: 5.0902
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011102128.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like107.86e-34239293155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     k+r+rWtpeLHe+Fv+av++LGGse+AtPk +l+lm+v+gLt++hvkSHLQkYR+
  XP_011102128.1 239 KTRMRWTPELHEAFVDAVNKLGGSERATPKGVLKLMNVEGLTIYHVKSHLQKYRT 293
                     68****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.573235296IPR017930Myb domain
TIGRFAMsTIGR015571.2E-24239293IPR006447Myb domain, plants
SuperFamilySSF466891.2E-17239293IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.605.8E-31239295IPR009057Homeodomain-like
PfamPF002492.2E-10241292IPR001005SANT/Myb domain
PfamPF143792.2E-21324371IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 460 aa     Download sequence    Send to blast
METSGALPRS FRCVPSPSEE KFPKLPDSPQ VTLAQELTTN VISSCPSTLS SNNKTIGHLF  60
SSASDHPGNL RGSLMSPDIN RPRKLPFIPK PLNDGISFSS SQLSPSVTRA RKLDGYAAED  120
NDVSWNTDGT ENFPDIPLNI HSQNSEETCT GLTASEDHFK RTDWQDWADQ LITVDDALDS  180
NLSDLLVDVN VPELDAKLLE LPPEVSSSQP QIHQHQHTPV ASAQSCPLVS SPCASPTIKT  240
RMRWTPELHE AFVDAVNKLG GSERATPKGV LKLMNVEGLT IYHVKSHLQK YRTARYKPES  300
SEGTSEKKSK TVSEITSLDL KTKMDITEAL RLQMEVQKQL HEQLEIQRNL QLRIEEQGKH  360
LQIMFEQQRK MEEEKLKASS ANVDEPSQPP TIEKQPSVSN VKAESSEHDH ASTHEIPNKE  420
EMSCETTALE ERSMDDSESS PPSKRARADE TGSSSTTVVT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A4e-31239297260Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B4e-31239297260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A4e-31239297260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C4e-31239297260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D4e-31239297260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F4e-31239297260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H4e-31239297260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J4e-31239297260Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011102128.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011102186.10.0protein PHOSPHATE STARVATION RESPONSE 1 isoform X2
TrEMBLA0A2G9H1I10.0A0A2G9H1I1_9LAMI; Uncharacterized protein
STRINGcassava4.1_007430m1e-133(Manihot esculenta)
STRINGXP_010262509.11e-131(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45822139
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.15e-67phosphate starvation response 1