PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011101395.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family G2-like
Protein Properties Length: 408aa    MW: 46030.1 Da    PI: 8.7442
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011101395.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.52.2e-3196149255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     prlrWtp+LH +Fv+a+e+LGG+e+AtPk++l+lm+v gL+++hvkSHLQ+YR+
  XP_011101395.1  96 PRLRWTPDLHLSFVHAIERLGGQERATPKAVLQLMNVRGLSISHVKSHLQMYRS 149
                     8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.40992152IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.9E-2992150IPR009057Homeodomain-like
SuperFamilySSF466891.79E-1494150IPR009057Homeodomain-like
TIGRFAMsTIGR015572.8E-2396151IPR006447Myb domain, plants
PfamPF002492.7E-897148IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    Send to blast
MADDEKMINE GDDSYSTEPA ADNTLSDSYD HENSSIDLNE EASSNYPMNE VSGISIQDGE  60
VVTKDERSGD SSKSGQGGNN NEKKTSVRQY IRSKMPRLRW TPDLHLSFVH AIERLGGQER  120
ATPKAVLQLM NVRGLSISHV KSHLQMYRSK KLDESGKVIG QANRLYFHGR NYLPGTGTAY  180
NKCSPLHHQL RLENGGIVFA RNSNQVDCTS NFSQNPQSHL SSRYQQWSSS YRQEPKFRPH  240
SRLISDLEKR KTTIPSRIHA MQESYHNASP LRPNQFLEGR RWPPPDLIPN LSKDKSETPI  300
SNICSTTLRP QSRWNICIDG TRTIPNKSTT LFHNSKSSTL EHPLRLQMTN EEKKINCKDH  360
SWLPADLQLS LSIGLSNNND KTDCSKGEDR DINTKLSLAL TPHSSTAT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A2e-1897151357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-1897151357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-1897151357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-1897151357Protein PHOSPHATE STARVATION RESPONSE 1
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011101395.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011101395.10.0myb-related protein 2
RefseqXP_020546992.10.0myb-related protein 2
TrEMBLA0A4D9ARE91e-116A0A4D9ARE9_SALSN; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55162334
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.18e-38G2-like family protein