PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011101099.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | ERF | ||||||||
Protein Properties | Length: 215aa MW: 23755.4 Da PI: 4.8397 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.2 | 4e-18 | 130 | 180 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp+ r++lg+++t +Aa+a++ a+ k++g XP_011101099.1 130 HYRGVRRRP-WGKYAAEIRDPTRK--GSRVWLGTYDTDVDAARAYDCAAFKMRG 180 7********.**********8542..4**********99*************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 8.2E-32 | 129 | 189 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 3.5E-13 | 130 | 180 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 5.6E-36 | 130 | 194 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 24.513 | 130 | 188 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 2.43E-29 | 130 | 188 | No hit | No description |
SuperFamily | SSF54171 | 5.1E-23 | 130 | 189 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 4.3E-13 | 131 | 142 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.3E-13 | 170 | 190 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009409 | Biological Process | response to cold | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009723 | Biological Process | response to ethylene | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:1902074 | Biological Process | response to salt | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence Send to blast |
METSDESLTL EFIRHHLLED FTSADSFFDN LTTLCFSDVY GDKPIWSPGE LESPSSSGPT 60 PLPDSPISQY FAFSPDLFEF ETKPQISMST TDTQDDPSFP ESPEAPVKAE PEFTELVTGS 120 GVTLLAAGRH YRGVRRRPWG KYAAEIRDPT RKGSRVWLGT YDTDVDAARA YDCAAFKMRG 180 RKAILNFPLD AGKPPPAANA GRKRRRPDGC ATPSP |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 5e-28 | 126 | 189 | 1 | 64 | ATERF1 |
3gcc_A | 5e-28 | 126 | 189 | 1 | 64 | ATERF1 |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 201 | 205 | RKRRR |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011101099.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011101099.1 | 1e-157 | ethylene-responsive transcription factor ERF107 | ||||
TrEMBL | A0A2G9G679 | 2e-78 | A0A2G9G679_9LAMI; Uncharacterized protein | ||||
STRING | Migut.F00526.1.p | 5e-72 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21 | 24 | 1165 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07580.1 | 1e-44 | ERF family protein |