PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011101097.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 174aa    MW: 19634.4 Da    PI: 7.4079
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011101097.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.1e-20112162255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ taeeAa a+++a+ +++g
  XP_011101097.1 112 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEEAALAYDKAAYRMRG 162
                     7********.***********9987..*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.2E-32111171IPR001471AP2/ERF domain
PROSITE profilePS5103224.368112170IPR001471AP2/ERF domain
SuperFamilySSF541711.63E-23112172IPR016177DNA-binding domain
CDDcd000182.57E-30112171No hitNo description
PfamPF008479.3E-15112162IPR001471AP2/ERF domain
SMARTSM003803.8E-34112172IPR001471AP2/ERF domain
PRINTSPR003673.2E-11113124IPR001471AP2/ERF domain
PRINTSPR003673.2E-11136152IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    Send to blast
MYQPIFSEMT AAELQFPAPL YCRSSSFSSL MPCLTETWGD LPLRVDDAED MVIYGLLRDA  60
VNDGWKPFND VKDEPRFEVV PEMSFATVRT EYVNAPPAVT APAMAPRPKG RHYRGVRQRP  120
WGKFAAEIRD PAKNGARVWL GTYETAEEAA LAYDKAAYRM RGSKALLNFP HRIG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A5e-37109173266ATERF1
3gcc_A5e-37109173266ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional activator (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011101097.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by ethylene. {ECO:0000269|PubMed:10945353}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022868653.14e-94ethylene-responsive transcription factor 1-like
SwissprotQ9LW504e-83ERF2_NICSY; Ethylene-responsive transcription factor 2
TrEMBLA0A2G9FVK02e-96A0A2G9FVK0_9LAMI; Uncharacterized protein
STRINGMigut.F00528.1.p8e-85(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40542245
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.14e-52ethylene responsive element binding factor 1