PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011101035.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 284aa    MW: 31645.3 Da    PI: 8.6724
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011101035.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP232.91.6e-10100137243
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAa 43 
                      y+GVr+++ +g+WvAeIr p +   r r++lg++   ++Aa
  XP_011101035.1 100 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYXAYDKAA 137
                     59******9.**********954...5*******98833333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.61E-2399152No hitNo description
Gene3DG3DSA:3.30.730.101.5E-21100151IPR001471AP2/ERF domain
PROSITE profilePS5103215.843100150IPR001471AP2/ERF domain
SuperFamilySSF541711.5E-15100151IPR016177DNA-binding domain
SMARTSM003801.6E-24100156IPR001471AP2/ERF domain
PfamPF008472.8E-6101138IPR001471AP2/ERF domain
PRINTSPR003671.4E-12101112IPR001471AP2/ERF domain
PRINTSPR003671.4E-12132152IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MAGNQETDLA FAAESASHIG ISLSQLILTS NSNTLDSIFS YCQPSECVAK QGFEPLGSSV  60
YLRQRDLLQK FSVENRGNPL IPRAEPGYHP TYFSSSKRKL YRGVRQRHWG KWVAEIRLPQ  120
NRMRVWLGTY XAYDKAAYKL RGEYARLNFP NLRDPTRLGL GDGARVNALK NAVDAKIQAI  180
CQKVKREKKA RRDAKKLEGN SNTNASIVSE SEKVAEKADS SPSIENTESW SGSVSEDGFW  240
RGDESPGSEW CSTVAPPGDM EMVGCSLARL PSYDPELIWE VLAN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-1396150163ATERF1
3gcc_A1e-1396150163ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011101035.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011101035.10.0LOW QUALITY PROTEIN: ethylene-responsive transcription factor ERF061
SwissprotQ9C7W22e-62ERF61_ARATH; Ethylene-responsive transcription factor ERF061
TrEMBLA0A2G9HU091e-133A0A2G9HU09_9LAMI; Uncharacterized protein
STRINGMigut.A00662.1.p1e-108(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36012345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.13e-61ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]