PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011100981.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

C2H2

Protein Properties

Length: 1294aa MW: 141702 Da PI: 5.1522

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011100981.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.5	4.8e-05	418	441	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 + C++C+ +F+ k++L +H+++ H XP_011100981.1 418 FHCNKCNITFNEKDELLQHQSSlH 441 78******************9988 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF54171	3.92E-6	287	339	IPR016177	DNA-binding domain
SMART	SM00355	0.015	418	441	IPR015880	Zinc finger, C2H2-like
PROSITE profile	PS50157	10.679	418	446	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	420	441	IPR007087	Zinc finger, C2H2
PROSITE profile	PS50157	9.764	463	490	IPR007087	Zinc finger, C2H2
SMART	SM00355	0.26	463	485	IPR015880	Zinc finger, C2H2-like
PROSITE pattern	PS00028	0	465	485	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 1294 aa Download sequence Send to blast
MASAAVDSPA TIADGGSLKL DSIPIVDIRL LSQSELYSLS LCSSSAFNPR RCDDVVIPKI 60 DRSVFNESAG SRKQTYSRLR LAPPSSSSTA TSRRRTPHLR PTATTFASIN SNNADPENAE 120 NSQIVSLLKQ LFVTDLNPDE LVPVKIDYSH SLPPQQLSSL PPTSLSNVVA TGYKRKRGRP 180 RRNELLGNEV ESVLGVSVVD INDDADGFSS LNEIVVHENV EDRDREVLNR DGVAVDLVAL 240 GAVEHPYREE IRRRTEGLQT EEELLGFLRG LNGQWGSRRK KKRIVDANEL GTVLPIGWKL 300 LLCVKKKNGQ VWLDCRRYIS PSGLYFVSCK GVSSYLLSLH GVHHTNSYSS ARHNEIIDDA 360 DKLTTFTVAD LAVQVDDRKE NLVSHTSLPT FGSTSGNHEM QVIIKARDLP EASAQDTFHC 420 NKCNITFNEK DELLQHQSSL HRRNRYKNGM RLTDGVIIKD GKYECQFCHK TFSERHRYNG 480 HIGAHVRYQA NIAGESLGGL VGESVDPSSF GFSVRDTMTV RSLGSDNVMD ICNATANNGL 540 NICSPRDEDN DHDGDLKEGK ENMMVAEATD IVVETNPCSV AEGNDNMIVA EATDVVAETS 600 PCSVTEGLLS DNRNKSFNDD AYADGCVVEK IDAGASLQGK LLGNRSPLPL DDATRGVTNV 660 GELQDSASME KPEQSMICRS SLLDSNNHME ECDVVNNEHI SPTNNELKPD SENFTVNGSI 720 FNFFGTYGDQ EKDLAANLMQ QNKFNHLPCK NIGNTDNTST SRSMVSKLDK VPDIRMLPTS 780 QDDEVFDQAS IPCSVRKFKV DETGSVGTSE KVGSKAGSDS VSRHDKVQFG ISSVIPSCAE 840 QENASKRYDT ESFACQLKEP AVQNSSKSRL ITLSGHESMY GSQNNDDGVC RRKILLPGFG 900 DFRNFGNGES SDPFSSRHAL INSNSVAGTE QDRKLGVCSG FAPATDKQFF TEDNMIRIFN 960 GALEENKEEP SASVLPKQSD VMEISVEAST FYATPANRSE VNEIDNSRKH ELSLSFGNFQ 1020 VEQCADSNTI EQHSYQPDNF NIQSIVHKTY GDQIPSSTIN SHIPGDMKQR RPSGISFPDP 1080 SFHIQTHELG SRFNEARPGW EWNRPRGEDI GTSGQNFMVG LANSSSQSAG GVTADASWRT 1140 GHGNVFQGCF DAASGHQISS PSFFGTFALT SDKGEEGSFG VNKNYDTRAD VVRPGRAEPV 1200 EYSFMGDQSS NSLAAESKIF SYTPNMDQGL GSTFWLGKDA LTPNTAHSNE VASVCVWCRN 1260 MFFHEPTQLG TQTGAIGTIC PSCSSRIPAP FNVL

Sequence ? help Back to Top

Protein Sequence Length: 1294 aa Download sequence Send to blast

MASAAVDSPA TIADGGSLKL DSIPIVDIRL LSQSELYSLS LCSSSAFNPR RCDDVVIPKI  60
DRSVFNESAG SRKQTYSRLR LAPPSSSSTA TSRRRTPHLR PTATTFASIN SNNADPENAE  120
NSQIVSLLKQ LFVTDLNPDE LVPVKIDYSH SLPPQQLSSL PPTSLSNVVA TGYKRKRGRP  180
RRNELLGNEV ESVLGVSVVD INDDADGFSS LNEIVVHENV EDRDREVLNR DGVAVDLVAL  240
GAVEHPYREE IRRRTEGLQT EEELLGFLRG LNGQWGSRRK KKRIVDANEL GTVLPIGWKL  300
LLCVKKKNGQ VWLDCRRYIS PSGLYFVSCK GVSSYLLSLH GVHHTNSYSS ARHNEIIDDA  360
DKLTTFTVAD LAVQVDDRKE NLVSHTSLPT FGSTSGNHEM QVIIKARDLP EASAQDTFHC  420
NKCNITFNEK DELLQHQSSL HRRNRYKNGM RLTDGVIIKD GKYECQFCHK TFSERHRYNG  480
HIGAHVRYQA NIAGESLGGL VGESVDPSSF GFSVRDTMTV RSLGSDNVMD ICNATANNGL  540
NICSPRDEDN DHDGDLKEGK ENMMVAEATD IVVETNPCSV AEGNDNMIVA EATDVVAETS  600
PCSVTEGLLS DNRNKSFNDD AYADGCVVEK IDAGASLQGK LLGNRSPLPL DDATRGVTNV  660
GELQDSASME KPEQSMICRS SLLDSNNHME ECDVVNNEHI SPTNNELKPD SENFTVNGSI  720
FNFFGTYGDQ EKDLAANLMQ QNKFNHLPCK NIGNTDNTST SRSMVSKLDK VPDIRMLPTS  780
QDDEVFDQAS IPCSVRKFKV DETGSVGTSE KVGSKAGSDS VSRHDKVQFG ISSVIPSCAE  840
QENASKRYDT ESFACQLKEP AVQNSSKSRL ITLSGHESMY GSQNNDDGVC RRKILLPGFG  900
DFRNFGNGES SDPFSSRHAL INSNSVAGTE QDRKLGVCSG FAPATDKQFF TEDNMIRIFN  960
GALEENKEEP SASVLPKQSD VMEISVEAST FYATPANRSE VNEIDNSRKH ELSLSFGNFQ  1020
VEQCADSNTI EQHSYQPDNF NIQSIVHKTY GDQIPSSTIN SHIPGDMKQR RPSGISFPDP  1080
SFHIQTHELG SRFNEARPGW EWNRPRGEDI GTSGQNFMVG LANSSSQSAG GVTADASWRT  1140
GHGNVFQGCF DAASGHQISS PSFFGTFALT SDKGEEGSFG VNKNYDTRAD VVRPGRAEPV  1200
EYSFMGDQSS NSLAAESKIF SYTPNMDQGL GSTFWLGKDA LTPNTAHSNE VASVCVWCRN  1260
MFFHEPTQLG TQTGAIGTIC PSCSSRIPAP FNVL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	277	282	RRKKKR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011100981.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011100981.1	0.0	uncharacterized protein LOC105179084
TrEMBL	A0A2G9GYV6	0.0	A0A2G9GYV6_9LAMI; Uncharacterized protein
STRING	Migut.C00133.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA7850	16	19