PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011099922.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | G2-like | ||||||||
Protein Properties | Length: 455aa MW: 49326.5 Da PI: 7.3426 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 101.8 | 4.5e-32 | 264 | 317 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_011099922.1 264 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 317 9****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 2.69E-15 | 261 | 317 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.9E-28 | 262 | 317 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.2E-23 | 264 | 317 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 8.4E-7 | 265 | 316 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0010158 | Biological Process | abaxial cell fate specification | ||||
GO:0010229 | Biological Process | inflorescence development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 455 aa Download sequence Send to blast |
MPLDGVFIEP SSKPVPDLSL HISPPNCNSS SPICNTASEV ASGIHRSTNS AKPRSCNSLI 60 ELSLANPAND EIRLQQSFGG GRAHQEEQPH SYYHHICHSN SQLNQINHGV SLLDVSDGLS 120 PIKSFPVYPN RPFPFLPVDH AKDPKMCFYQ TPYPSWSSTL SSPSSLCSSL SSPSHQYYSG 180 SLDHHIPFLN PGPNASSPTA AYRVPSGGSA GGGGRFNGLS SYQLQHHHTH HQYGMGHSLE 240 ASHHGIMRSR SLPKLPAKRS MRAPRMRWTS TLHARFVHAV ELLGGHERAT PKSVLELMDV 300 KDLTLAHVKS HLQMYRTVKT TDKPAASSDG SADDDLSTIG SGGDGARLQL FIDHRGPSDG 360 SSPQDADYPS SATTLWSNSS SSREGWSQTN AAGESHGLVR SSSFPSPSNS GRLIQESEIS 420 HSKSCTVSDP ENYKIPSLEF TLGLSRQEWG EKEQN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4r_A | 1e-16 | 265 | 319 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 1e-16 | 265 | 319 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 1e-16 | 265 | 319 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 1e-16 | 265 | 319 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011099922.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011099922.1 | 0.0 | transcription repressor KAN1-like isoform X3 | ||||
TrEMBL | A0A2G9GXW6 | 1e-156 | A0A2G9GXW6_9LAMI; Uncharacterized protein | ||||
STRING | VIT_04s0043g00340.t01 | 1e-125 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16560.1 | 4e-49 | G2-like family protein |