PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011099920.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family G2-like
Protein Properties Length: 458aa    MW: 49607.7 Da    PI: 7.3575
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011099920.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.84.5e-32264317255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  XP_011099920.1 264 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 317
                     9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.69E-15261317IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.9E-28262317IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-23264317IPR006447Myb domain, plants
PfamPF002498.5E-7265316IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010158Biological Processabaxial cell fate specification
GO:0010229Biological Processinflorescence development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    Send to blast
MPLDGVFIEP SSKPVPDLSL HISPPNCNSS SPICNTASEV ASGIHRSTNS AKPRSCNSLI  60
ELSLANPAND EIRLQQSFGG GRAHQEEQPH SYYHHICHSN SQLNQINHGV SLLDVSDGLS  120
PIKSFPVYPN RPFPFLPVDH AKDPKMCFYQ TPYPSWSSTL SSPSSLCSSL SSPSHQYYSG  180
SLDHHIPFLN PGPNASSPTA AYRVPSGGSA GGGGRFNGLS SYQLQHHHTH HQYGMGHSLE  240
ASHHGIMRSR SLPKLPAKRS MRAPRMRWTS TLHARFVHAV ELLGGHERAT PKSVLELMDV  300
KDLTLAHVKS HLQMYRTVKT TDKPAASSGH SDGSADDDLS TIGSGGDGAR LQLFIDHRGP  360
SDGSSPQDAD YPSSATTLWS NSSSSREGWS QTNAAGESHG LVRSSSFPSP SNSGRLIQES  420
EISHSKSCTV SDPENYKIPS LEFTLGLSRQ EWGEKEQN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-16265319458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-16265319458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A1e-16265319357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-16265319357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-16265319357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-16265319357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-16265319458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-16265319458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-16265319458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-16265319458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-16265319458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-16265319458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011099920.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011099920.10.0transcription repressor KAN1-like isoform X1
TrEMBLA0A2G9GXW61e-161A0A2G9GXW6_9LAMI; Uncharacterized protein
STRINGVIT_04s0043g00340.t011e-128(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24682355
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16560.19e-49G2-like family protein