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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_011099811.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
|
| Family |
BBR-BPC |
| Protein Properties |
Length: 296aa MW: 33153 Da PI: 8.9313 |
| Description |
BBR-BPC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_011099811.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GAGA_bind | 313.3 | 8.2e-96 | 10 | 296 | 27 | 301 |
GAGA_bind 27 qlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvensla....salpvgvqvlsgtksidslqqlsep 117
m++ aerda+irern+al e+k a+aerdma lqrd+a+aern+a+ erd+++++l ++e s++ ++ g + sg+k i+ +q++ +
XP_011099811.1 10 TFMAITAERDAAIRERNMALEERKRAFAERDMAMLQRDAAIAERNAAIQERDEAIASLRFREGSMNdnstIPDSLGNELESGSKRIHYQHQIRAS 104
5799999*******************************************************999976333344566778888999877775555 PP
GAGA_bind 118 qledsave.lreeeklealpieeaaeeakekkkkkkrqrakkpkekkak......kkkkksekskkkvkkesader............skaekks 193
+ e s+ + lr ++++ea ++ +++ + +++k ++ +k k+++ k+ ++++ + + + ++ ++k
XP_011099811.1 105 EPEYSPRGsLRGSDITEASETAKSR----RGRQPKDGKVTKPSKSPRVGkrmaegMSKQVNSAPSNGWN------TqqdfesdeedldKQVSWK- 188
5555555444444444444433322....2222222222222222222200011122332222222222......1233444555663555555. PP
GAGA_bind 194 idlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdh 288
+l+ln++++Des++PvPvC+CtG+++ CY+WGnGGWqSaCCtttiS+yPLP+++++r +R++grKmS++af+klL++LaaeGyd+s p+DLkdh
XP_011099811.1 189 DNLGLNQINFDESAMPVPVCTCTGSPQPCYRWGNGGWQSACCTTTISMYPLPQVANKRYSRVGGRKMSGSAFSKLLNRLAAEGYDFSAPLDLKDH 283
69********************************************************************************************* PP
GAGA_bind 289 WAkHGtnkfvtir 301
WAkHGtn++ t++
XP_011099811.1 284 WAKHGTNRYSTLK 296
*********9986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 296 aa
Download sequence Send
to blast |
MDHNHLTIKT FMAITAERDA AIRERNMALE ERKRAFAERD MAMLQRDAAI AERNAAIQER 60
DEAIASLRFR EGSMNDNSTI PDSLGNELES GSKRIHYQHQ IRASEPEYSP RGSLRGSDIT 120
EASETAKSRR GRQPKDGKVT KPSKSPRVGK RMAEGMSKQV NSAPSNGWNT QQDFESDEED 180
LDKQVSWKDN LGLNQINFDE SAMPVPVCTC TGSPQPCYRW GNGGWQSACC TTTISMYPLP 240
QVANKRYSRV GGRKMSGSAF SKLLNRLAAE GYDFSAPLDL KDHWAKHGTN RYSTLK
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. {ECO:0000269|PubMed:14731261}. |
