PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011099758.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 245aa    MW: 27242.4 Da    PI: 6.1733
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011099758.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.71e-08134174954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  XP_011099758.1 134 ARHRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIRYVKFL 174
                     699*****************87.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000836.24E-11115179No hitNo description
PROSITE profilePS5088814.767125174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.22E-14131189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-12131180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.7E-13131187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.4E-6135174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010197Biological Processpolar nucleus fusion
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MDLSHHRFTN TTWEPYNIPM DQGHLLQDQT PFDHHPQAQW PYFPPIHSQN EPSDSSPTQL  60
LPSPNFDQMG SAAFKASEAG DHQDDEPEEE LGAMKEMMFK IAAMQPVDID PATIRKPRRR  120
NVRISDDPQS SVAARHRRER ISEKIRILQR LVPGGTKMDT ASMLDEAIRY VKFLKRQIRI  180
LQANHHQPPC IGIATPTGAA TAEEWVAVTT KATATATAAA GTSSSYLFGG NNNNDGAGVE  240
AFNME
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011099758.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020554927.11e-179transcription factor HEC3
TrEMBLA0A2Z7AI312e-84A0A2Z7AI31_9LAMI; Uncharacterized protein
STRINGMigut.H00738.1.p5e-69(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA75223101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00120.14e-46bHLH family protein