PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011098777.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 379aa    MW: 42289.1 Da    PI: 4.3719
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011098777.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15.1e-194998255
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  XP_011098777.1 49 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 98
                    789******.7*********33....35**********************99998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.54E-3248105No hitNo description
PfamPF008479.1E-144998IPR001471AP2/ERF domain
SuperFamilySSF541713.53E-1949106IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.9E-2749105IPR001471AP2/ERF domain
SMARTSM003805.9E-3649112IPR001471AP2/ERF domain
PROSITE profilePS5103219.55949106IPR001471AP2/ERF domain
PRINTSPR003675.3E-85061IPR001471AP2/ERF domain
PRINTSPR003675.3E-87288IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    Send to blast
MARKRKAGEE LDDHEKLNPG EGNLASLNEM VKEAAAVVAL GGVKRARKRF VGVRQRPSGR  60
WVAEIKDTIQ KIRVWLGTFD TAEEAARAYD EAACLLRGAN TRTNFWPCSP NSSSTPALPS  120
RITNLLLSKL KARNNALAAS SDSTSNSSSS LASLMPSIAQ EREMEYTDEV PDFSEPYFGD  180
FINDPDENFS MENNSLIAAS DYKSLSFESS VIEADSNCQT SEHKVSSELE MENEIEENSA  240
SLEAVDLHFV DEIGSSSSAY SPFEIAEEIS KPLVQDDEPL MLSEAMKRMN YERKFSASLY  300
AFNGINECLK LKLGNRFNRS EQITRLRNAC KLNQEEMMMM ENNVDREGMK GNEDDSLEKE  360
DGELSLWSSI DLPTICFVN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1442114779Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011098777.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011098777.10.0ethylene-responsive transcription factor 10-like
TrEMBLA0A4D9BU191e-144A0A4D9BU19_SALSN; EREBP-like factor
STRINGcassava4.1_008867m1e-120(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43102037
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-23related to AP2 11