PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011097899.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | bZIP | ||||||||
Protein Properties | Length: 379aa MW: 42917.6 Da PI: 5.532 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.5 | 3.9e-10 | 86 | 115 | 5 | 34 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeek 34 k +rr+++NReAAr+sR+RKka++++Le+ XP_011097899.1 86 KIQRRLAQNREAARKSRLRKKAYVQQLETS 115 779************************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 8.4E-5 | 82 | 145 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.059 | 84 | 128 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.6E-7 | 86 | 119 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.83E-6 | 86 | 126 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.6E-7 | 87 | 128 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 89 | 104 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.2E-27 | 171 | 245 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 379 aa Download sequence Send to blast |
MYSDFQVPDM TSPTTQFAPP SRIGIYEPLR QIGMWEDTFD DNISAGTGVC IIMETEAKLD 60 DKTEYASDKS LEHAEDSQAS KSISEKIQRR LAQNREAARK SRLRKKAYVQ QLETSRMKLA 120 QLELELERAR QQGLLIASAT ANVGICGTIN PGIAAFEMEY RHWIDEQERK ISELRNLLQS 180 PIGDAELRMV VENVLNHYCN LFRMKRDAAR ADAFYLESGM WRTSVERFFL WIGGFRPSEL 240 INVVMPQLEP LTEEQIASVN NLRHSCVQAE DALSQGMEKL QQTLAQSLTF LAAGAGNYSS 300 QTAAALEKLE SLESFINQAD HLREQTLHQM SRILTTRQAA KGLLAFGEYF QRLRALSSLW 360 SARSIENLAN LQNDANSIR |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011097899.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011097899.1 | 0.0 | transcription factor TGA4 isoform X2 | ||||
Swissprot | Q39237 | 1e-149 | TGA1_ARATH; Transcription factor TGA1 | ||||
TrEMBL | A0A2G9GQM5 | 0.0 | A0A2G9GQM5_9LAMI; Uncharacterized protein | ||||
STRING | Migut.C00214.1.p | 0.0 | (Erythranthe guttata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65210.5 | 1e-133 | bZIP family protein |