PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011097839.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 228aa    MW: 25112.9 Da    PI: 8.2105
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011097839.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.32.5e-203179355
             AP2  3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++GVr ++ +gr++AeIrd ++    ++r++lg+f++aeeAa+a++ a+++l+g
  XP_011097839.1 31 FRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDSAEEAARAYDTAARSLRG 79
                    8*******.**********883....5*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008477.8E-133079IPR001471AP2/ERF domain
CDDcd000187.44E-313087No hitNo description
SMARTSM003803.0E-373093IPR001471AP2/ERF domain
PROSITE profilePS5103223.3673087IPR001471AP2/ERF domain
SuperFamilySSF541712.88E-223188IPR016177DNA-binding domain
PRINTSPR003671.3E-103142IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.5E-323188IPR001471AP2/ERF domain
PRINTSPR003671.3E-105369IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
MRRGRAAARQ VAAAVHGGEG NGSGESKEIR FRGVRKRPWG RYAAEIRDPW KKTRVWLGTF  60
DSAEEAARAY DTAARSLRGP KAKTNFPLTP SGNVFHDFNP QNPNQPQINN NPNDPFMDSR  120
YYPQDQDIIA QQRPTSSGMS STVESFSGPR PPPPPPLVQQ QRRHPRSPPV VPDDCRSDCD  180
SSSSVVDDTE CDIASSSCKK PLPFDLNMLP PVDAAADLDE LACTALRL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-221799476Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011097839.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0461112e-56KJ046111.1 Sesamum indicum clone TilSSR_17312 microsatellite Sesame_17312 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011097839.11e-168ethylene-responsive transcription factor 3-like
SwissprotQ9SXS81e-59ERF3_TOBAC; Ethylene-responsive transcription factor 3
TrEMBLA0A2G9I2B81e-123A0A2G9I2B8_9LAMI; Uncharacterized protein
STRINGMigut.M01719.1.p1e-105(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33302347
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.14e-31ethylene responsive element binding factor 3