PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011097448.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
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Family | GeBP | ||||||||
Protein Properties | Length: 352aa MW: 39106 Da PI: 6.2971 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 79.6 | 4.8e-25 | 48 | 142 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 +f+r+w+e Dei +LqGl+d+ +++ d+ fy +++ +s ++ksql+eK+rrL+kKf+ +++ ++g ++s + hd+ ++lsk++W XP_011097448.1 48 KFHRIWTEPDEIRFLQGLLDCSSQHL-AFPRDLGIFYARFSNTMSQPYTKSQLSEKLRRLRKKFRVISTRLSKGLDQSQLSLHDRALYDLSKQLW 141 699******************77665.6677**************************************************************** PP DUF573 97 g 97 + XP_011097448.1 142 H 142 7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 2.7E-28 | 49 | 142 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 352 aa Download sequence Send to blast |
MDSTLIQPHH HKPSASKLPI KRKTPDPNPL PPPDASPDTI DGRAPPFKFH RIWTEPDEIR 60 FLQGLLDCSS QHLAFPRDLG IFYARFSNTM SQPYTKSQLS EKLRRLRKKF RVISTRLSKG 120 LDQSQLSLHD RALYDLSKQL WHPEYAATSP FSGARNVGLN HSSNTVVGGY VDGKLKKSSL 180 VGIKVDFSPT LQAITSGFDQ ENDANLELDS VQNENGGGDE GGVAVGDIYV EDNRNEEVKL 240 SEVNVEFEGE EEAMEDEGHD TFGGGIGAVK VVAGQSIDSD CKNKIGEVAA KVVMNVFDEC 300 FKDVKRKLLV GRVGERVGVE SFQVRWQQQM IAELDVLGSR LRLALEHSLQ KH |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_011097448.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011097448.1 | 0.0 | uncharacterized protein LOC105176365 | ||||
TrEMBL | A0A2G9I1N1 | 1e-171 | A0A2G9I1N1_9LAMI; Uncharacterized protein | ||||
STRING | Migut.K00897.1.p | 1e-128 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA12822 | 19 | 21 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28040.1 | 2e-17 | DNA-binding storekeeper protein-related transcriptional regulator |