PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011097382.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family NAC
Protein Properties Length: 394aa    MW: 43951.3 Da    PI: 5.5989
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011097382.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM90.53e-28552001128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tk 79 
                     lp+G++F+P+d el+ ++L++k    +      ++++   ++ + +i++++P++Lp  vk++ ++++fF k  ++ya+g+rk+r          +
  XP_011097382.1  55 LPAGVKFDPSDVELL-DHLAAKRGVGNlkphifIDEFIPtLEGIeGICYTHPENLP-GVKKDGSSVHFFYKIVNAYASGQRKRRRiqdqesliNA 147
                     799************.778877655553455432222222555556**********.67788899*******************74666666544 PP

             NAM  80 sgyWkatgkdkevlskkgelvglkktLvfy.....kgrapkgektdWvmheyrl 128
                     + +W++tgk+k+v++ +g ++g kk++v+y        + k+ k++Wvmh+++l
  XP_011097382.1 148 HVRWHKTGKTKPVME-NGVHIGFKKIMVLYatsktGSMRTKPDKCNWVMHQFHL 200
                     899************.999***********7665323566778*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.31E-3340219IPR003441NAC domain
PROSITE profilePS5100529.21155219IPR003441NAC domain
PfamPF023651.5E-1156200IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    Send to blast
MARAWLIDSR GLAKKVKNAG LPAAYQIKDC GANRQCPNCQ HLIDNSDVSH EWPGLPAGVK  60
FDPSDVELLD HLAAKRGVGN LKPHIFIDEF IPTLEGIEGI CYTHPENLPG VKKDGSSVHF  120
FYKIVNAYAS GQRKRRRIQD QESLINAHVR WHKTGKTKPV MENGVHIGFK KIMVLYATSK  180
TGSMRTKPDK CNWVMHQFHL GTDEDEQEGE YVVSKIFYQL PKETDDKNGT SLVIEEPDIG  240
TAQVIPRTPK TNTPDPPRAE KTPPSDCGSD NYFIQALVKE EDYLKELSPR SCGSWLGDEM  300
QYTTCLAGNS EAFYLSRADS LLCNEILDPY AASGNLRSKN GSSTHLGDVQ QRDGNSSCGI  360
GDLDNLDLDT PPDFQLTDLQ FASQDSVFDW LDRF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1132136RKRRR
2133137KRRRI
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011097382.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011097382.10.0SUPPRESSOR OF GAMMA RESPONSE 1
TrEMBLA0A2G9GBK20.0A0A2G9GBK2_9LAMI; Uncharacterized protein
STRINGXP_009799111.11e-158(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA81752229
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.13e-88NAC family protein