PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011096933.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family NAC
Protein Properties Length: 599aa    MW: 67971.9 Da    PI: 5.9714
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011096933.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM181.32.4e-5661331128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     lppGfrFhPtdeelv +yLk+k++g+k++l e+i+evd+yk+ePwdLp k  + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v 
  XP_011096933.1   6 LPPGFRFHPTDEELVAYYLKRKINGRKIDL-EIIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVS 99 
                     79****************************.99***************6434555777************************************* PP

             NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     s + ++vg+kktLv+y+grap+g +tdWvmheyrl
  XP_011096933.1 100 S-QMRAVGMKKTLVYYRGRAPHGARTDWVMHEYRL 133
                     9.9999***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-644156IPR003441NAC domain
PROSITE profilePS5100561.7636156IPR003441NAC domain
PfamPF023655.0E-307133IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 599 aa     Download sequence    Send to blast
MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIDLEIIPE VDLYKCEPWD LPGKSLLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVSS QMRAVGMKKT LVYYRGRAPH  120
GARTDWVMHE YRLDERECEN PSGLQDAYAL CRVFKKSLNT SPKIGDHYVA SASDRSSSID  180
LHCEGRYEDL DSSDYQMPLT SSPATNMTSS STDARWMQYL SEEAFSFNNP YSNSPPIPYP  240
PSRVDIALEC ARLQHRFSLP PLEVQDFSQG AFANNDPRMS THPSVFHIEN TNQPADIVQE  300
ILSVAQASQD LQNQETWAGI NHGPVDDFSF FLNSSQPADM ISNCSKYLDN LGGDQNHHRS  360
IEIGDNDEVF QTGRMVENLR WIGMSDKELE KAFSDDFKTV PIENINSNIH GNQFHDFQGE  420
TSSHRFNAFT KATNENISIG PHVNDNVSDH NFLDNDGDID DFSTSPSFEV YEKTEINHGL  480
LVSTRQAAQT FYHKVVPSRT VQVHINPTTM MHQVPVSKSC SVSIPKHGSL SEKFVSFSRN  540
MVRNMSMKIM KSQNCQENEI PKVVEEGGTF CEEVNNIKPY FTFALALCAI WVQIVTPFS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A2e-58115615168NAC domain-containing protein 19
3swm_B2e-58115615168NAC domain-containing protein 19
3swm_C2e-58115615168NAC domain-containing protein 19
3swm_D2e-58115615168NAC domain-containing protein 19
3swp_A2e-58115615168NAC domain-containing protein 19
3swp_B2e-58115615168NAC domain-containing protein 19
3swp_C2e-58115615168NAC domain-containing protein 19
3swp_D2e-58115615168NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00212DAPTransfer from AT1G65910Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011096933.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011096933.10.0NAC domain-containing protein 45
TrEMBLA0A2G9GMX50.0A0A2G9GMX5_9LAMI; Uncharacterized protein
STRINGMigut.K00745.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14952348
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.11e-146NAC domain containing protein 28