PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011096526.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

bHLH

Protein Properties

Length: 237aa MW: 26541.7 Da PI: 5.3569

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011096526.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.7	0.00024	185	221	13	54
HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R+r ++ Lr ++P a ++s +++L +Av+Y+ksL XP_011096526.1 185 RQRTRKMVKVLRGIVPGA-----SRMSTVAVLDEAVRYLKSL 221 555666667799999998.....7****************99 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	10.493	172	221	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	0.01	181	227	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	3.67E-5	183	226	No hit	No description
SuperFamily	SSF47459	3.93E-7	183	230	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.2E-4	184	231	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence Send to blast
MHSHQPHFSG KPMQPLADQF DYYMQNAPMS SLLNGGIMPP GIKPLMPFHS FDIQPSDACP 60 RNFVIFDQTT NRSQIMYHPG INSKFFYPGL GVDAVCQDNI NQKDANDEIK LTSPLEEDSD 120 DIDALLSTEN EENEDFDDEE VSTARTGAVY KCDSPDSCSN YESPSEKSGS LFRKFSGSCC 180 NDKKRQRTRK MVKVLRGIVP GASRMSTVAV LDEAVRYLKS LRVEAQKLGA RNFKDHA

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011096526.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011096522.1	1e-179	transcription factor bHLH144
Refseq	XP_011096525.1	1e-179	transcription factor bHLH144
Refseq	XP_011096526.1	1e-179	transcription factor bHLH144
Refseq	XP_020554104.1	1e-179	transcription factor bHLH144
TrEMBL	A0A2G9I127	1e-110	A0A2G9I127_9LAMI; Uncharacterized protein
STRING	Migut.H01376.1.p	9e-89	(Erythranthe guttata)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G29950.2	2e-31	bHLH family protein