PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011096448.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 272aa    MW: 30794.5 Da    PI: 4.9132
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011096448.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.78e-20119169255
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrd    + k +r++lg+f taeeAa a+++a+++++g
  XP_011096448.1 119 HYRGVRRRP-WGKYAAEIRDsT--R-KGARIWLGTFETAEEAAMAYDKAALRIRG 169
                     8********.**********32..2.24*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.2E-31118178IPR001471AP2/ERF domain
CDDcd000187.06E-31118177No hitNo description
PROSITE profilePS5103223.657119177IPR001471AP2/ERF domain
PfamPF008473.6E-14119169IPR001471AP2/ERF domain
SMARTSM003805.5E-38119183IPR001471AP2/ERF domain
SuperFamilySSF541711.63E-23119178IPR016177DNA-binding domain
PRINTSPR003673.0E-11120131IPR001471AP2/ERF domain
PRINTSPR003673.0E-11143159IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MAVERQHSMS SEAILENVWA NFISKNDANF TKQGTFESSK SWEGLPSLDR DEPMEILERL  60
PSLGRWISMG AEMWEQLLDG TIIPSNNSME NIVGSENMSK DSIKDADDTS KAEKKVIKHY  120
RGVRRRPWGK YAAEIRDSTR KGARIWLGTF ETAEEAAMAY DKAALRIRGP KTHLNFPLEQ  180
VAKALGISCY DNIYMTSSSK YTTDQPVGSI ATYLSCPNII SDHRKRVARD GQVEEDSFVA  240
EEPAQRRSRG NDDVLEFEDL GSEYLESLLY TF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-27118178161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00441DAPTransfer from AT4G18450Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011096448.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011096448.10.0ethylene-responsive transcription factor ERF091
TrEMBLA0A2G9GYT91e-115A0A2G9GYT9_9LAMI; Uncharacterized protein
STRINGPOPTR_0004s05110.11e-91(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA112371823
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.11e-38ERF family protein